Modeling study, 3D-QSAR and molecular docking of 9H-purine derivatives as EGFR inhibitors

被引:1
作者
Kasmi, Rania [1 ]
EL Ouardi, Youssef [1 ,2 ]
Bouachrine, Mohammed. [3 ,4 ]
Ouammou, Abdelkrim. [1 ]
机构
[1] Sidi Mohamed Ben Abdellah Univ, Fac Sci Dhar Mahraz, LIMOME Lab, Fes, Morocco
[2] Lappeenranta Univ Technol, Lab Separat Technol, POB 20, FI-53851 Lappeenranta, Finland
[3] Moulay Ismail Univ Meknes, Fac Sci, Nat Subst & Mol Chem Lab SOOM, Meknes, Morocco
[4] Sultan Moulay Sliman Univ, EST Khenifra, Benimellal, Morocco
关键词
Targeted therapies; 3D-QSAR; Molecular docking; 9H-purine; EGFR; TYROSINE KINASE INHIBITORS; ROSCOVITINE; VALIDATION; PURINE; COMSIA; POTENT; CDC2;
D O I
10.1016/j.matpr.2022.05.311
中图分类号
T [工业技术];
学科分类号
08 ;
摘要
New therapeutic strategies, called targeted therapies, are now possible thanks to recent advances in oncology. These treatments more specifically reach cancer cells by disrupting the biological mechanisms that lead to their multiplication: they essentially act at the level of growth factor receptors. Tyrosine kinase inhibitors are small molecules that act specifically inside tumor cells by blocking the activation of tyrosine kinases. They are part of the new generation of anti-cancer drugs called targeted therapies. Using the tools of theoretical chemistry and drug design techniques, we constructed a structure-activity relationship model (3D-QSAR) based on the pharmacophore of a series of 9H-purine derivatives taken from the literature, whose EGFR inhibitors are quantitatively known. The QSAR model obtained, which is statistically satisfactory, will be used, on the one hand, to study the structural characteristics responsible for EGFR inhibition and, on the other hand, to predict structures of the same chemical family having a better activity on this protein kinase.We then performed the molecular docking protocol on the molecules considered relevant due to their activity on EGFR. This study aims to enrich the interpretations extracted from the contour maps of the 3D-QSAR model and to search in silico for the most favorable mode of interaction of these inhibitors within the receptor (PDB: 5XGN). The theoretical approaches used in our research should help to better understand the mechanisms involved in the ligand/receptor interaction and, ultimately, to rationalize the design of new molecules for therapeutic purposes.Copyright (c) 2022 Elsevier Ltd. All rights reserved. Selection and peer-review under responsibility of scientific committee of the International Congress of Chemical Engineering: News Innovations and Recent Applications.
引用
收藏
页码:6312 / 6323
页数:12
相关论文
共 40 条
  • [1] Combined 3D-QSAR Modeling and molecular docking study on indolinone derivatives as inhibitors of 3-phosphoinositide-dependent protein kinase-1
    AbdulHameed, Mohamed Diwan M.
    Hamza, Adel
    Liu, Junjun
    Zhan, Chang-Guo
    [J]. JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2008, 48 (09) : 1760 - 1772
  • [2] [Anonymous], Life Sciences and Material Sciences | BIOVIA - Dassault Systemes
  • [3] [Anonymous], ADT / AutoDockTools - AutoDock
  • [4] [Anonymous], RPD BANK RCSB PDB HO
  • [5] [Anonymous], GLOBAL COLLABORATION
  • [6] Improved antiviral activity of the aryloxymethoxyalaninyl phosphoramidate (APA) prodrug of abacavir (ABC) is due to the formation of markedly increased carbovir 5′-triphosphate metabolite levels
    Balzarini, J
    Aquaro, S
    Hassan-Abdallah, A
    Daluge, SM
    Perno, CF
    McGuigan, C
    [J]. FEBS LETTERS, 2004, 573 (1-3) : 38 - 44
  • [7] Role of conformational alteration in the epidermal growth factor receptor (EGFR) function
    Bishayee, S
    [J]. BIOCHEMICAL PHARMACOLOGY, 2000, 60 (08) : 1217 - 1223
  • [8] Development of new hydrogen-bond descriptors and their application to comparative molecular field analyses
    Böhm, M
    Klebe, G
    [J]. JOURNAL OF MEDICINAL CHEMISTRY, 2002, 45 (08) : 1585 - 1597
  • [9] Tyrosine kinase inhibitors: Rationale, mechanisms of action, and implications for drug resistance
    Busse, D
    Yakes, FM
    Lenferink, AEG
    Arteaga, CL
    [J]. SEMINARS IN ONCOLOGY, 2001, 28 (05) : 47 - 55
  • [10] Therapeutic strategy for advanced EGFR mutant non-small-cell lung carcinoma
    Cadranel, Jacques
    Ruppert, Anne-Marie
    Beau-Faller, Michele
    Wislez, Marie
    [J]. CRITICAL REVIEWS IN ONCOLOGY HEMATOLOGY, 2013, 88 (03) : 477 - 493