BioMoby web services to support clustering of co-regulated genes based on similarity of promoter configurations

被引：11

作者：

Kerhornou, Arnaud ^{[1
]}

Guigo, Roderic

机构：

[1] Inst Municipal Invest Med, Ctr Regulacio Genom, E-08003 Barcelona, Catalonia, Spain

[2] Inst Municipal Invest Med, Res Grp Biomed Informat, E-08003 Barcelona, Catalonia, Spain

[3] Univ Pompeu Fabra, E-08003 Barcelona, Catalonia, Spain

[4] Wellcome Trust Genome Campus, EBI, Cambridge CB10 1SD, England

来源：

BIOINFORMATICS | 2007年 / 23卷 / 14期

关键词：

D O I：

10.1093/bioinformatics/btm252

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

Here we present a computational protocol to analyze the promoter regions of a given set of co-expressed genes, and its implementation through the use of Web services technologies. This protocol aims to cluster a set of co-regulated genes in subsets of genes showing similar configurations of transcription factor binding sites. All the steps of this protocol have been developed as web services that are compliant with BioMoby specifications.

引用

页码：1831 / 1833

页数：3

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