Medicinal plant phytochemicals and their inhibitory activities against pancreatic lipase: molecular docking combined with molecular dynamics simulation approach

被引:35
作者
Ahmed, Bilal [1 ]
Ashfaq, Usman Ali [1 ]
Mirza, Muhammad Usman [2 ]
机构
[1] Govt Coll Univ Faisalabad GCUF, Dept Bioinformat & Biotechnol, Faisalabad, Pakistan
[2] Univ Leuven, Rega Inst Med Res, Dept Pharmaceut & Pharmacol Sci, Med Chem, Leuven, Belgium
关键词
Obesity; pancreatic lipase; phytochemicals; molecular docking; CARDIOVASCULAR-DISEASE; OBESITY;
D O I
10.1080/14786419.2017.1320786
中图分类号
O69 [应用化学];
学科分类号
081704 ;
摘要
Obesity is the worst health risk worldwide, which is linked to a number of diseases. Pancreatic lipase is considered as an affective cause of obesity and can be a major target for controlling the obesity. The present study was designed to find out best phytochemicals against pancreatic lipase through molecular docking combined with molecular dynamics (MD) simulation. For this purpose, a total of 3770 phytochemicals were docked against pancreatic lipase and ranked them on the basis of binding affinity. Finally, 10 molecules (Kushenol K, Rosmarinic acid, Reserpic acid, Munjistin, Leachianone G, Cephamycin C, Arctigenin, 3-O-acetylpadmatin, Geniposide and Obtusin) were selected that showed strong bonding with the pancreatic lipase. MD simulations were performed on top five compounds using AMBER16. The simulated complexes revealed stability and ligands remained inside the binding pocket. This study concluded that these finalised molecules can be used as drug candidate to control obesity. [GRAPHICS] .
引用
收藏
页码:1123 / 1129
页数:7
相关论文
共 18 条
[1]  
Apurba Mukherjee Apurba Mukherjee, 2015, International Journal of Current Microbiology and Applied Sciences, V4, P558
[2]  
Archana P, 2010, INT J PHARM BIOSCIEN, V1, P224
[3]   Overview of Epidemiology and Contribution of Obesity to Cardiovascular Disease [J].
Bastien, Marjorie ;
Poirier, Paul ;
Lemieux, Isabelle ;
Despres, Jean-Pierre .
PROGRESS IN CARDIOVASCULAR DISEASES, 2014, 56 (04) :369-381
[4]   The Protein Data Bank [J].
Berman, HM ;
Westbrook, J ;
Feng, Z ;
Gilliland, G ;
Bhat, TN ;
Weissig, H ;
Shindyalov, IN ;
Bourne, PE .
NUCLEIC ACIDS RESEARCH, 2000, 28 (01) :235-242
[5]  
Case D.A., 2014, Amber 14, V14
[6]   Lipase inhibitory activity of chlorophyll a, isofucosterol and saringosterol isolated from chloroform fraction of Sargassum thunbergii [J].
Kim, Koth-Bong-Woo-Ri ;
Kim, Min-Ji ;
Ahn, Dong-Hyun .
NATURAL PRODUCT RESEARCH, 2014, 28 (16) :1310-1312
[7]   Obesity and Cardiovascular Diseases [J].
Lavie, Carl J. ;
McAuley, Paul A. ;
Church, Timothy S. ;
Milani, Richard V. ;
Blair, Steven N. .
JOURNAL OF THE AMERICAN COLLEGE OF CARDIOLOGY, 2014, 63 (14) :1345-1354
[8]   Genetic studies of body mass index yield new insights for obesity biology [J].
Locke, Adam E. ;
Kahali, Bratati ;
Berndt, Sonja I. ;
Justice, Anne E. ;
Pers, Tune H. ;
Day, Felix R. ;
Powell, Corey ;
Vedantam, Sailaja ;
Buchkovich, Martin L. ;
Yang, Jian ;
Croteau-Chonka, Damien C. ;
Esko, Tonu ;
Fall, Tove ;
Ferreira, Teresa ;
Gustafsson, Stefan ;
Kutalik, Zoltan ;
Luan, Jian'an ;
Maegi, Reedik ;
Randall, Joshua C. ;
Winkler, Thomas W. ;
Wood, Andrew R. ;
Workalemahu, Tsegaselassie ;
Faul, Jessica D. ;
Smith, Jennifer A. ;
Zhao, Jing Hua ;
Zhao, Wei ;
Chen, Jin ;
Fehrmann, Rudolf ;
Hedman, Asa K. ;
Karjalainen, Juha ;
Schmidt, Ellen M. ;
Absher, Devin ;
Amin, Najaf ;
Anderson, Denise ;
Beekman, Marian ;
Bolton, Jennifer L. ;
Bragg-Gresham, L. ;
Buyske, Steven ;
Demirkan, Ayse ;
Deng, Guohong ;
Ehret, Georg B. ;
Feenstra, Bjarke ;
Feitosa, Mary F. ;
Fischer, Krista ;
Goel, Anuj ;
Gong, Jian ;
Jackson, Anne U. ;
Kanoni, Stavroula ;
Kleber, Marcus E. ;
Kristiansson, Kati .
NATURE, 2015, 518 (7538) :197-+
[9]   ff14SB: Improving the Accuracy of Protein Side Chain and Backbone Parameters from ff99SB [J].
Maier, James A. ;
Martinez, Carmenza ;
Kasavajhala, Koushik ;
Wickstrom, Lauren ;
Hauser, Kevin E. ;
Simmerling, Carlos .
JOURNAL OF CHEMICAL THEORY AND COMPUTATION, 2015, 11 (08) :3696-3713
[10]  
Masmoudi-Allouche F., 2016, J PHARMACOGN PHYTOCH, V5, P15