Direct analysis of site-specific N-glycopeptides of serological proteins in dried blood spot samples

被引:9
作者
Choi, Na Young [1 ,2 ]
Hwang, Heeyoun [1 ]
Ji, Eun Sun [1 ]
Park, Gun Wook [1 ]
Lee, Ju Yeon [1 ]
Lee, Hyun Kyoung [1 ,2 ]
Kim, Jin Young [1 ]
Yoo, Jong Shin [1 ,2 ]
机构
[1] Korea Basic Sci Inst, Biomed Omics Grp, 162 YeonGuDanji Ro, Cheongju 28119, Chungbuk, South Korea
[2] Chungnam Natl Univ, Grad Sch Analyt Sci & Technol, Daehak Ro 99, Daejeon 305764, South Korea
关键词
Dried blood spot; N-glycosylation; Glycoproteomics; GLYCOSYLATION; IDENTIFICATION; GLYCOPROTEINS; QUANTITATION; ENRICHMENT; PLASMA;
D O I
10.1007/s00216-017-0438-z
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Dried blood spot (DBS) samples have a number of advantages, especially with respect to ease of collection, transportation, and storage and to reduce biohazard risk. N-glycosylation is a major post-translational modification of proteins in human blood that is related to a variety of biological functions, including metastasis, cell-cell interactions, inflammation, and immunization. Here, we directly analyzed tryptic N-glycopeptides from glycoproteins in DBS samples using liquid chromatography-tandem mass spectrometry (LC-MS/MS) without centrifugation of blood samples, depletion of major proteins, desalting of tryptic peptides, and enrichment of N-glycopeptides. Using this simple method, we identified a total of 41 site-specific N-glycopeptides from 16 glycoproteins in the DBS samples, from immunoglobulin gamma 1 (IgG-1, 10 mg/mL) down to complement component C7 (50 mu g/mL). Of these, 32 N-glycopeptides from 14 glycoproteins were consistently quantified over 180 days stored at room temperature. The major abundant glycoproteins in the DBS samples were IgG-1 and IgG-2, which contain nine asialo-fucosylated complex types of 16 different N-glycopeptide isoforms. Sialo-non-fucosylated complex types were primarily detected in the other glycoproteins such as alpha-1-acid glycoprotein 1, 2, alpha-1-antitypsin, alpha-2-macroglobulin, haptoglobin, hemopexin, Ig alpha 1, 2 chain C region, kininogen-1, prothrombin, and serotransferrin. We first report the characterization of site-specific N-glycoproteins in DBS samples by LC-MS/MS with minimal sample preparation.
引用
收藏
页码:4971 / 4981
页数:11
相关论文
共 26 条
[11]   In-depth analysis of site-specific N-glycosylation in vitronectin from human plasma by tandem mass spectrometry with immunoprecipitation [J].
Hwang, Heeyoun ;
Lee, Ju Yeon ;
Lee, Hyun Kyoung ;
Park, Gun Wook ;
Jeong, Hoi Keun ;
Moon, Myeong Hee ;
Kim, Jin Young ;
Yoo, Jong Shin .
ANALYTICAL AND BIOANALYTICAL CHEMISTRY, 2014, 406 (30) :7999-8011
[12]   Analysis of fucosylation in liver-secreted N-glycoproteins from human hepatocellular carcinoma plasma using liquid chromatography with tandem mass spectrometry [J].
Ji, Eun Sun ;
Hwang, Heeyoun ;
Park, Gun Wook ;
Lee, Ju Yeon ;
Lee, Hyun Kyoung ;
Choi, Na Young ;
Jeong, Hoi Keun ;
Kim, Kwang Hoe ;
Kim, Jin Young ;
Lee, Seungho ;
Ahn, Yeong Hee ;
Yoo, Jong Shin .
ANALYTICAL AND BIOANALYTICAL CHEMISTRY, 2016, 408 (27) :7761-7774
[13]   The human erythrocyte proteome - Analysis by ion trap mass spectrometry [J].
Kakhniashvili, DG ;
Bulla, LA ;
Goodman, SR .
MOLECULAR & CELLULAR PROTEOMICS, 2004, 3 (05) :501-509
[14]   Quantitative analysis of low-abundance serological proteins with peptide affinity-based enrichment and pseudo-multiple reaction monitoring by hybrid quadrupole time-of-flight mass spectrometry [J].
Kim, Kwang Hoe ;
Ahn, Yeong Hee ;
Ji, Eun Sun ;
Lee, Ju Yeon ;
Kim, Jin Young ;
An, Hyun Joo ;
Yoo, Jong Shin .
ANALYTICA CHIMICA ACTA, 2015, 882 :38-48
[15]   ASSEMBLY OF ASPARAGINE-LINKED OLIGOSACCHARIDES [J].
KORNFELD, R ;
KORNFELD, S .
ANNUAL REVIEW OF BIOCHEMISTRY, 1985, 54 :631-664
[16]   Characterization of Site-Specific N-Glycopeptide Isoforms of α-1-Acid Glycoprotein from an Interlaboratory Study Using LC-MS/MS [J].
Lee, Ju Yeon ;
Lee, Hyun Kyoung ;
Park, Gun Wook ;
Hwang, Heeyoun ;
Jeong, Hoi Keun ;
Yun, Ki Na ;
Ji, Eun Sun ;
Kim, Kwang Hoe ;
Kim, Jun Seok ;
Kim, Jong Won ;
Yun, Sung Ho ;
Choi, Chi-Won ;
Kim, Seung Il ;
Lim, Jong-Sun ;
Jeong, Seul-Ki ;
Paik, Young-Ki ;
Lee, Soo-Youn ;
Park, Jisook ;
Kim, Su Yeon ;
Choi, Young-Jin ;
Kim, Yong-In ;
Seo, Jawon ;
Cho, Je-Yoel ;
Oh, Myoung Jin ;
Seo, Nari ;
An, Hyun Joo ;
Kim, Jin Young ;
Yoo, Jong Shin .
JOURNAL OF PROTEOME RESEARCH, 2016, 15 (12) :4146-4164
[17]   Integrated GlycoProteome Analyzer (I-GPA) for Automated Identification and Quantitation of Site-Specific N-Glycosylation [J].
Park, Gun Wook ;
Kim, Jin Young ;
Hwang, Heeyoun ;
Lee, Ju Yeon ;
Ahn, Young Hee ;
Lee, Hyun Kyoung ;
Ji, Eun Sun ;
Kim, Kwang Hoe ;
Jeong, Hoi Keun ;
Yun, Ki Na ;
Kim, Yong-Sam ;
Ko, Jeong-Heon ;
An, Hyun Joo ;
Kim, Jae Han ;
Paik, Young-Ki ;
Yoo, Jong Shin .
SCIENTIFIC REPORTS, 2016, 6
[18]   Regulation of antibody effector functions through IgG Fc N-glycosylation [J].
Quast, Isaak ;
Peschke, Benjamin ;
Lunemann, Jan D. .
CELLULAR AND MOLECULAR LIFE SCIENCES, 2017, 74 (05) :837-847
[19]  
RAJAGOPALAN K, 1961, J BIOL CHEM, V236, P1059
[20]   Human Plasma N-glycosylation as Analyzed by Matrix-Assisted Laser Desorption/Ionization-Fourier Transform Ion Cyclotron Resonance-MS Associates with Markers of Inflammation and Metabolic Health [J].
Reiding, Karli R. ;
Ruhaak, L. Renee ;
Uh, Hae-Won ;
El Bouhaddani, Said ;
van den Akker, Erik B. ;
Plomp, Rosina ;
McDonnell, Liam A. ;
Houwing-Duistermaat, Jeanine J. ;
Slagboom, P. Eline ;
Beekman, Marian ;
Wuhrer, Manfred .
MOLECULAR & CELLULAR PROTEOMICS, 2017, 16 (02) :228-242