Rapid neurogenesis through transcriptional activation in human stem cells

被引:158
作者
Busskamp, Volker [1 ,2 ]
Lewis, Nathan E. [1 ,2 ,3 ,4 ]
Guye, Patrick [5 ]
Ng, Alex Hm [1 ,2 ,6 ]
Shipman, Seth L. [1 ,2 ]
Byrne, Susan M. [1 ,2 ]
Sanjana, Neville E. [7 ,8 ]
Murn, Jernej [9 ,10 ]
Li, Yinqing [5 ]
Li, Shangzhong [11 ]
Stadler, Michael [12 ,13 ,14 ]
Weiss, Ron [5 ]
Church, George M. [1 ,2 ]
机构
[1] Harvard Univ, Sch Med, Dept Genet, Boston, MA 02115 USA
[2] Harvard Univ, Wyss Inst Biol Inspired Engn, Boston, MA 02115 USA
[3] Brigham Young Univ, Dept Biol, Provo, UT 84602 USA
[4] Univ Calif San Diego, Dept Pediat, San Diego, CA 92103 USA
[5] MIT, Dept Biol Engn, Cambridge, MA 02139 USA
[6] Harvard Univ, Sch Med, Dept Syst Biol, Boston, MA 02115 USA
[7] Broad Inst MIT & Harvard, Cambridge Ctr, Cambridge, MA USA
[8] MIT, Dept Biol Engn, Dept Brain & Cognit Sci, McGovern Inst Brain Res, Cambridge, MA 02139 USA
[9] Harvard Univ, Sch Med, Dept Cell Biol, Boston, MA 02115 USA
[10] Boston Childrens Hosp, Div Newborn Med, Boston, MA USA
[11] Univ Calif San Diego, Dept Bioengn, San Diego, CA 92103 USA
[12] Friedrich Miescher Inst, Biomed Res, CH-4002 Basel, Switzerland
[13] Swiss Inst Bioinformat, Basel, Switzerland
[14] Univ Basel, Basel, Switzerland
基金
瑞士国家科学基金会;
关键词
gene regulatory networks; microRNAs; neurogenesis; stem cell; differentiation; transcriptomics; NEURONAL DIFFERENTIATION; TRANSIENT EXPRESSION; CORTICAL DEVELOPMENT; HUMAN FIBROBLASTS; PRONEURAL GENES; BHLH PROTEINS; IN-VITRO; MATURATION; MECHANISMS; CONVERSION;
D O I
10.15252/msb.20145508
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Advances in cellular reprogramming and stem cell differentiation now enable ex vivo studies of human neuronal differentiation. However, it remains challenging to elucidate the underlying regulatory programs because differentiation protocols are laborious and often result in low neuron yields. Here, we overexpressed two Neurogenin transcription factors in human- induced pluripotent stem cells and obtained neurons with bipolar morphology in 4 days, at greater than 90% purity. The high purity enabled mRNA and microRNA expression profiling during neurogenesis,thus revealing the genetic programs involved in the rapid transition from stem cell to neuron. The resulting cells exhibited transcriptional, morphological and functional signatures of differentiated neurons, with greatest transcriptional similarity to prenatal human brain samples. Our analysis revealed a network of key transcription factors and microRNAs that promoted loss of pluripotency and rapid neurogenesis via progenitor states. Perturbations of key transcription factors affected homogeneity and phenotypic properties of the resulting neurons, suggesting that a systems-level view of the molecular biology of differentiation may guide subsequent manipulation of human stem cells to rapidly obtain diverse neuronal types.
引用
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页数:21
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