Pooled testing to isolate infected individuals

被引:4
作者
Aldridge, Matthew [1 ]
机构
[1] Univ Leeds, Sch Math, Leeds LS2 9JT, W Yorkshire, England
来源
2021 55TH ANNUAL CONFERENCE ON INFORMATION SCIENCES AND SYSTEMS (CISS) | 2021年
基金
英国科研创新办公室;
关键词
D O I
10.1109/CISS50987.2021.9400313
中图分类号
TP [自动化技术、计算机技术];
学科分类号
0812 ;
摘要
The usual problem for group testing is this: For a given number of individuals and a given prevalence, how many tests T* are required to find every infected individual? In real life, however, the problem is usually different: For a given number of individuals, a given prevalence, and a limited number of tests T much smaller than T*, how can these tests best be used? In this conference paper, we outline some recent results on this problem for two models. First, the 'practical' model, which is relevant for screening for COVID-19 and has tests that are highly specific but imperfectly sensitive, shows that simple algorithms can be outperformed at low prevalence and high sensitivity. Second, the 'theoretical' model of very low prevalence with perfect tests gives interesting new mathematical results.
引用
收藏
页数:5
相关论文
共 12 条
[1]  
Aldridge M., 2020, CONSERVATIVE 2 STAGE CONSERVATIVE 2 STAGE
[2]  
Aldridge M., 2021, BOOK CHAPTER
[3]   Group Testing: An Information Theory Perspective [J].
Aldridge, Matthew ;
Johnson, Oliver ;
Scarlett, Jonathan .
FOUNDATIONS AND TRENDS IN COMMUNICATIONS AND INFORMATION THEORY, 2019, 15 (3-4) :196-392
[4]   Group Testing Algorithms: Bounds and Simulations [J].
Aldridge, Matthew ;
Baldassini, Leonardo ;
Johnson, Oliver .
IEEE TRANSACTIONS ON INFORMATION THEORY, 2014, 60 (06) :3671-3687
[5]  
Broder A. Z., 2020, NOTE DOUBLE POOLING NOTE DOUBLE POOLING
[6]  
Coja-Oghlan A., 2019, INFORM THEORETIC ALG INFORM THEORETIC ALG
[7]   The detection of defective members of large populations [J].
Dorfman, R .
ANNALS OF MATHEMATICAL STATISTICS, 1943, 14 :436-440
[8]   Performance of Group Testing Algorithms With Near-Constant Tests Per Item [J].
Johnson, Oliver ;
Aldridge, Matthew ;
Scarlett, Jonathan .
IEEE TRANSACTIONS ON INFORMATION THEORY, 2019, 65 (02) :707-723
[9]   SAFFRON: A Fast, Efficient, and Robust Framework for Group Testing Based on Sparse-Graph Codes [J].
Lee, Kangwook ;
Chandrasekher, Kabir ;
Pedarsani, Ramtin ;
Ramchandran, Kannan .
IEEE TRANSACTIONS ON SIGNAL PROCESSING, 2019, 67 (17) :4649-4664
[10]  
Loick P., 2020, OPTIMAL GROUP TESTIN OPTIMAL GROUP TESTIN