The Protein Data Bank at 40: Reflecting on the Past to Prepare for the Future

被引：83

作者：

Berman, Helen M. ^{[1
]}

Kleywegt, Gerard J. ^{[2
]}

Nakamura, Haruki ^{[3
]}

Markley, John L. ^{[4
]}

机构：

[1] Rutgers State Univ, Dept Chem & Chem Biol, RCSB PDB, Piscataway, NJ 08854 USA

[2] European Bioinformat Inst, Prot Data Bank Europe, Cambridge CB10 1SD, England

[3] Osaka Univ, Inst Prot Res, Prot Data Bank Japan, Suita, Osaka 5650871, Japan

[4] Univ Wisconsin, BioMagResBank, Madison, WI 53706 USA

来源：

STRUCTURE | 2012年 / 20卷 / 03期

基金：

英国惠康基金; 美国国家科学基金会;

关键词：

PHENYLALANINE TRANSFER-RNA; MOLECULAR-STRUCTURE; RIBOSOMAL-SUBUNIT; NUCLEIC-ACIDS; RESOLUTION; MODEL;

D O I：

10.1016/j.str.2012.01.010

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

A symposium celebrating the 40th anniversary of the Protein Data Bank archive (PDB), organized by the Worldwide Protein Data Bank, was held at Cold Spring Harbor Laboratory (CSHL) October 28-30, 2011. PDB40's distinguished speakers highlighted four decades of innovation in structural biology, from the early era of structural determination to future directions for the field.

引用

页码：391 / 396

页数：6

共 22 条

[1]

[Anonymous], 1971, NATURE-NEW BIOL, V233, P223

[2] The complete atomic structure of the large ribosomal subunit at 2.4 Å resolution [J].

Ban, N ;

Nissen, P ;

Hansen, J ;

Moore, PB ;

Steitz, TA .

SCIENCE, 2000, 289 (5481) :905-920

[3] Announcing the worldwide Protein Data Bank [J].

Berman, H ;

Henrick, K ;

Nakamura, H .

NATURE STRUCTURAL BIOLOGY, 2003, 10 (12) :980-980

[4] The Protein Data Bank: a historical perspective [J].

Berman, Helen M. .

ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES, 2008, 64 :88-95

[5] PROTEIN DATA BANK - COMPUTER-BASED ARCHIVAL FILE FOR MACROMOLECULAR STRUCTURES [J].

BERNSTEIN, FC ;

KOETZLE, TF ;

WILLIAMS, GJB ;

MEYER, EF ;

BRICE, MD ;

RODGERS, JR ;

KENNARD, O ;

SHIMANOUCHI, T ;

TASUMI, M .

JOURNAL OF MOLECULAR BIOLOGY, 1977, 112 (03) :535-542

[6] Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics [J].

Carter, AP ;

Clemons, WM ;

Brodersen, DE ;

Morgan-Warren, RJ ;

Wimberly, BT ;

Ramakrishnan, V .

NATURE, 2000, 407 (6802) :340-348

[7] MolProbity: structure validation and all-atom contact analysis for nucleic acids and their complexes [J].

Davis, IW ;

Murray, LW ;

Richardson, JS ;

Richardson, DC .

NUCLEIC ACIDS RESEARCH, 2004, 32 :W615-W619

[8]

Dickerson RE, 1997, PROTEIN SCI, V6, P2483

[9] STRUCTURE OF A B-DNA DODECAMER - CONFORMATION AND DYNAMICS .1. [J].

DREW, HR ;

WING, RM ;

TAKANO, T ;

BROKA, C ;

TANAKA, S ;

ITAKURA, K ;

DICKERSON, RE .

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA-BIOLOGICAL SCIENCES, 1981, 78 (04) :2179-2183

[10] DETERMINATION OF THE 3-DIMENSIONAL SOLUTION STRUCTURE OF THE ANTIHYPERTENSIVE AND ANTIVIRAL PROTEIN BDS-I FROM THE SEA-ANEMONE ANEMONIA-SULCATA - A STUDY USING NUCLEAR MAGNETIC-RESONANCE AND HYBRID DISTANCE GEOMETRY-DYNAMICAL SIMULATED ANNEALING [J].

DRISCOLL, PC ;

GRONENBORN, AM ;

BERESS, L ;

CLORE, GM .

BIOCHEMISTRY, 1989, 28 (05) :2188-2198

← 1 2 3 →