In vitro cell cycle oscillations exhibit a robust and hysteretic response to changes in cytoplasmic density

被引:7
作者
Jin, Minjun [1 ,2 ]
Tavella, Franco [1 ]
Wang, Shiyuan [1 ]
Yang, Qiong [1 ,2 ,3 ]
机构
[1] Univ Michigan, Dept Biophys, Ann Arbor, MI 48109 USA
[2] Univ Michigan, Dept Computat Med & Bioinformat, Ann Arbor, MI 48109 USA
[3] Univ Michigan, Dept Phys, Ann Arbor, MI 48109 USA
基金
美国国家科学基金会;
关键词
cell cycle oscillator; robustness; cytoplasmic density; hysteresis; macromolecular crowding; MASS MEASUREMENTS SHOW; ESCHERICHIA-COLI; APOPTOSIS; VOLUME; PHOSPHORYLATION; CONFINEMENT; DIFFUSION; DYNAMICS; BEHAVIOR; NETWORK;
D O I
10.1073/pnas.2109547119
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Cells control the properties of the cytoplasm to ensure proper functioning of biochemical processes. Recent studies showed that cytoplasmic density varies in both physiological and pathological states of cells undergoing growth, division, differentiation, apoptosis, senescence, and metabolic starvation. Little is known about how cellular processes cope with these cytoplasmic variations. Here, we study how a cell cycle oscillator comprising cyclin-dependent kinase (Cdk1) responds to changes in cytoplasmic density by systematically diluting or concentrating cycling Xenopus egg extracts in cell-like microfluidic droplets. We found that the cell cycle maintains robust oscillations over a wide range of deviations from the endogenous density: as low as 0.2x to more than 1.22x relative cytoplasmic density (RCD). A further dilution or concentration from these values arrested the system in a low or high steady state of Cdk1 activity, respectively. Interestingly, diluting an arrested cytoplasm of 1.22x RCD recovers oscillations at lower than 1x RCD. Thus, the cell cycle switches reversibly between oscillatory and stable steady states at distinct thresholds depending on the direction of tuning, forming a hysteresis loop. We propose a mathematical model which recapitulates these observations and predicts that the Cdk1/Wee1/Cdc25 positive feedback loops do not contribute to the observed robustness, supported by experiments. Our system can be applied to study how cytoplasmic density affects other cellular processes.
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页数:12
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