WheatOmics: A platform combining multiple omics data to accelerate functional genomics studies in wheat

被引:238
作者
Ma, Shengwei [1 ]
Wang, Meng [2 ]
Wu, Jianhui [4 ]
Guo, Weilong [5 ]
Chen, Yongming [5 ]
Li, Guangwei [6 ]
Wang, Yanpeng [7 ]
Shi, Weiming [2 ]
Xia, Guangmin [8 ]
Fu, Daolin [3 ]
Kang, Zhensheng [4 ]
Ni, Fei [3 ]
机构
[1] Nanjing Agr Univ, State Key Lab Crop Genet & Germplasm Enhancement, Nanjing 210095, Peoples R China
[2] Chinese Acad Sci, Inst Soil Sci, State Key Lab Soil & Sustainable Agr, Nanjing 210008, Peoples R China
[3] Shandong Agr Univ, Coll Agron, State Key Lab Crop Biol, Tai An 271018, Shandong, Peoples R China
[4] Northwest A&F Univ, Coll Agron, State Key Lab Crop Stress Biol Arid Areas, Yangling 712100, Shaanxi, Peoples R China
[5] China Agr Univ, Beijing Key Lab Crop Genet Improvement, State Key Lab Agrobiotechnol, Key Lab Crop Heterosis & Utilizat, Beijing 100193, Peoples R China
[6] Henan Agr Univ, Coll Agron, Longzi Lake Campus, Zhengzhou 450046, Henan, Peoples R China
[7] Chinese Acad Sci, Innovat Acad Seed Design, Inst Genet & Dev Biol, State Key Lab Plant Cell & Chromosome Engn, Beijing 100101, Peoples R China
[8] Shandong Univ, Sch Life Sci, Key Lab Plant Dev & Environm Adaptat Biol, Minist Educ, Qingdao 266237, Peoples R China
基金
中国国家自然科学基金;
关键词
D O I
10.1016/j.molp.2021.10.006
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
引用
收藏
页码:1965 / 1968
页数:4
相关论文
共 11 条
[1]   Shifting the limits in wheat research and breeding using a fully annotated reference genome [J].
Appels, Rudi ;
Eversole, Kellye ;
Feuillet, Catherine ;
Keller, Beat ;
Rogers, Jane ;
Stein, Nils ;
Pozniak, Curtis J. ;
Choulet, Frederic ;
Distelfeld, Assaf ;
Poland, Jesse ;
Ronen, Gil ;
Sharpe, Andrew G. ;
Pozniak, Curtis ;
Barad, Omer ;
Baruch, Kobi ;
Keeble-Gagnere, Gabriel ;
Mascher, Martin ;
Ben-Zvi, Gil ;
Josselin, Ambre-Aurore ;
Himmelbach, Axel ;
Balfourier, Francois ;
Gutierrez-Gonzalez, Juan ;
Hayden, Matthew ;
Koh, ChuShin ;
Muehlbauer, Gary ;
Pasam, Raj K. ;
Paux, Etienne ;
Rigault, Philippe ;
Tibbits, Josquin ;
Tiwari, Vijay ;
Spannagl, Manuel ;
Lang, Daniel ;
Gundlach, Heidrun ;
Haberer, Georg ;
Mayer, Klaus F. X. ;
Ormanbekova, Danara ;
Prade, Verena ;
Simkova, Hana ;
Wicker, Thomas ;
Swarbreck, David ;
Rimbert, Helene ;
Felder, Marius ;
Guilhot, Nicolas ;
Kaithakottil, Gemy ;
Keilwagen, Jens ;
Leroy, Philippe ;
Lux, Thomas ;
Twardziok, Sven ;
Venturini, Luca ;
Juhasz, Angela .
SCIENCE, 2018, 361 (6403) :661-+
[2]   Origin and adaptation to high altitude of Tibetan semi-wild wheat [J].
Guo, Weilong ;
Xin, Mingming ;
Wang, Zihao ;
Yao, Yingyin ;
Hu, Zhaorong ;
Song, Wanjun ;
Yu, Kuohai ;
Chen, Yongming ;
Wang, Xiaobo ;
Guan, Panfeng ;
Appels, Rudi ;
Peng, Huiru ;
Ni, Zhongfu ;
Sun, Qixin .
NATURE COMMUNICATIONS, 2020, 11 (01)
[3]   Uncovering hidden variation in polyploid wheat [J].
Krasileva, Ksenia V. ;
Vasquez-Gross, Hans A. ;
Howell, Tyson ;
Bailey, Paul ;
Paraiso, Francine ;
Clissold, Leah ;
Simmonds, James ;
Ramirez-Gonzalez, Ricardo H. ;
Wang, Xiaodong ;
Borrill, Philippa ;
Fosker, Christine ;
Ayling, Sarah ;
Phillips, Andrew L. ;
Uauy, Cristobal ;
Dubcovsky, Jorge .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2017, 114 (06) :E913-E921
[4]   A high-quality genome assembly highlights rye genomic characteristics and agronomically important genes [J].
Li, Guangwei ;
Wang, Lijian ;
Yang, Jianping ;
He, Hang ;
Jin, Huaibing ;
Li, Xuming ;
Ren, Tianheng ;
Ren, Zhenglong ;
Li, Feng ;
Han, Xue ;
Zhao, Xiaoge ;
Dong, Lingli ;
Li, Yiwen ;
Song, Zhongping ;
Yan, Zehong ;
Zheng, Nannan ;
Shi, Cuilan ;
Wang, Zhaohui ;
Yang, Shuling ;
Xiong, Zijun ;
Zhang, Menglan ;
Sun, Guanghua ;
Zheng, Xu ;
Gou, Mingyue ;
Ji, Changmian ;
Du, Junkai ;
Zheng, Hongkun ;
Dolezel, Jaroslav ;
Deng, Xing Wang ;
Stein, Nils ;
Yang, Qinghua ;
Zhang, Kunpu ;
Wang, Daowen .
NATURE GENETICS, 2021, 53 (04) :574-+
[5]   A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies [J].
McWhite, Claire D. ;
Papoulas, Ophelia ;
Drew, Kevin ;
Cox, Rachael M. ;
June, Viviana ;
Dong, Oliver Xiaoou ;
Kwon, Taejoon ;
Wan, Cuihong ;
Salmi, Mari L. ;
Roux, Stanley J. ;
Browning, Karen S. ;
Chen, Z. Jeffrey ;
Ronald, Pamela C. ;
Marcotte, Edward M. .
CELL, 2020, 181 (02) :460-+
[6]   Wheat Ms2 encodes for an orphan protein that confers male sterility in grass species [J].
Ni, Fei ;
Qi, Juan ;
Hao, Qunqun ;
Lyu, Bo ;
Luo, Ming-Cheng ;
Wang, Yan ;
Chen, Fengjuan ;
Wang, Shuyun ;
Zhang, Chaozhong ;
Epstein, Lynn ;
Zhao, Xiangyu ;
Wang, Honggang ;
Zhang, Xiansheng ;
Chen, Cuixia ;
Sun, Lanzhen ;
Fu, Daolin .
NATURE COMMUNICATIONS, 2017, 8
[7]  
Sato K., 2021, DNA RES, V28
[8]   Multiple wheat genomes reveal global variation in modern breeding [J].
Walkowiak, Sean ;
Gao, Liangliang ;
Monat, Cecile ;
Haberer, Georg ;
Kassa, Mulualem T. ;
Brinton, Jemima ;
Ramirez-Gonzalez, Ricardo H. ;
Kolodziej, Markus C. ;
Delorean, Emily ;
Thambugala, Dinushika ;
Klymiuk, Valentyna ;
Byrns, Brook ;
Gundlach, Heidrun ;
Bandi, Venkat ;
Siri, Jorge Nunez ;
Nilsen, Kirby ;
Aquino, Catharine ;
Himmelbach, Axel ;
Copetti, Dario ;
Ban, Tomohiro ;
Venturini, Luca ;
Bevan, Michael ;
Clavijo, Bernardo ;
Koo, Dal-Hoe ;
Ens, Jennifer ;
Wiebe, Krystalee ;
N'Diaye, Amidou ;
Fritz, Allen K. ;
Gutwin, Carl ;
Fiebig, Anne ;
Fosker, Christine ;
Fu, Bin Xiao ;
Accinelli, Gonzalo Garcia ;
Gardner, Keith A. ;
Fradgley, Nick ;
Gutierrez-Gonzalez, Juan ;
Halstead-Nussloch, Gwyneth ;
Hatakeyama, Masaomi ;
Koh, Chu Shin ;
Deek, Jasline ;
Costamagna, Alejandro C. ;
Fobert, Pierre ;
Heavens, Darren ;
Kanamori, Hiroyuki ;
Kawaura, Kanako ;
Kobayashi, Fuminori ;
Krasileva, Ksenia ;
Kuo, Tony ;
McKenzie, Neil ;
Murata, Kazuki .
NATURE, 2020, 588 (7837) :277-283
[9]   TaANR1-TaBG1 and TaWabi5-TaNRT2s/NARs Link ABA Metabolism and Nitrate Acquisition in Wheat Roots1[OPEN] [J].
Wang, Meng ;
Zhang, Pengli ;
Liu, Qian ;
Li, Guangjie ;
Di, Dongwei ;
Xia, Guangmin ;
Kronzucker, Herbert J. ;
Fang, Shuang ;
Chu, Jinfang ;
Shi, Weiming .
PLANT PHYSIOLOGY, 2020, 182 (03) :1440-1453
[10]   From Genetic Stock to Genome Editing: Gene Exploitation in Wheat [J].
Wang, Meng ;
Wang, Shubin ;
Liang, Zhen ;
Shi, Weiming ;
Gao, Caixia ;
Xia, Guangmin .
TRENDS IN BIOTECHNOLOGY, 2018, 36 (02) :160-172