Single-molecule fluorescence methods for the study of nucleic acids

被引:111
作者
Ha, T
机构
[1] Univ Illinois, Dept Phys, Urbana, IL 61801 USA
[2] Univ Illinois, Ctr Biophys & Comp Biol, Urbana, IL 61801 USA
关键词
D O I
10.1016/S0959-440X(00)00204-9
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Single-molecule fluorescence methods and biomechanical tools provide exciting new opportunities to probe biochemical processes in unprecedented detail. The detection and spectroscopy of single fluorophores have recently been used to observe conformational changes and biochemical events involving nucleic acids. A number of fluorescence observables, including localization, quenching, polarization response and fluorescence resonance energy transfer, have been utilized. An exciting new opportunity of combining fluorescence methods and biomechanical tools to study the structural changes and functions of enzymes that participate in nucleic acid metabolism has also arisen.
引用
收藏
页码:287 / 292
页数:6
相关论文
共 31 条
[11]   Sequence dependent rigidity of single stranded DNA [J].
Goddard, NL ;
Bonnet, G ;
Krichevsky, O ;
Libchaber, A .
PHYSICAL REVIEW LETTERS, 2000, 85 (11) :2400-2403
[12]   Ligand-induced conformational changes observed in single RNA molecules [J].
Ha, T ;
Zhuang, XW ;
Kim, HD ;
Orr, JW ;
Williamson, JR ;
Chu, S .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1999, 96 (16) :9077-9082
[13]   Probing the interaction between two single molecules: Fluorescence resonance energy transfer between a single donor and a single acceptor [J].
Ha, T ;
Enderle, T ;
Ogletree, DF ;
Chemla, DS ;
Selvin, PR ;
Weiss, S .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1996, 93 (13) :6264-6268
[14]   Hindered rotational diffusion and rotational jumps of single molecules [J].
Ha, T ;
Glass, J ;
Enderle, T ;
Chemla, DS ;
Weiss, S .
PHYSICAL REVIEW LETTERS, 1998, 80 (10) :2093-2096
[15]  
HA T, 2001, IN PRESS METHODS
[16]   Simultaneous observation of individual ATPase and mechanical events by a single myosin molecule during interaction with actin [J].
Ishijima, A ;
Kojima, H ;
Funatsu, T ;
Tokunaga, M ;
Higuchi, H ;
Tanaka, H ;
Yanagida, T .
CELL, 1998, 92 (02) :161-171
[17]   A single myosin head moves along an actin filament with regular steps of 5.3 nanometres [J].
Kitamura, K ;
Tokunaga, M ;
Iwane, AH ;
Yanagida, T .
NATURE, 1999, 397 (6715) :129-134
[18]   Fast kinetics of chromatin assembly revealed by single-molecule videomicroscopy and scanning force microscopy [J].
Ladoux, B ;
Quivy, JP ;
Doyle, P ;
du Roure, O ;
Almouzni, G ;
Viovy, JL .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2000, 97 (26) :14251-14256
[19]   Single-molecule enzymatic dynamics [J].
Lu, HP ;
Xun, LY ;
Xie, XS .
SCIENCE, 1998, 282 (5395) :1877-1882
[20]   Replication by a single DNA polymerase of a stretched single-stranded DNA [J].
Maier, B ;
Bensimon, D ;
Croquette, V .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2000, 97 (22) :12002-12007