Genetically encoded single circularly permuted fluorescent protein-based intensity indicators

被引:13
|
作者
Liu, Wenfeng [1 ]
Deng, Mengying [1 ]
Yang, Chengming [2 ]
Liu, Feng [1 ]
Guan, Xinmeng [1 ]
Du, Yichen [3 ]
Wang, Liang [1 ]
Chu, Jun [1 ,4 ]
机构
[1] Chinese Acad Sci, Shenzhen Inst Adv Technol, Lab Biomed Opt & Mol Imaging, Shenzhen 518055, Peoples R China
[2] Southern Univ Sci & Technol Hosp, Dept Ophthalmol, Shenzhen 518055, Peoples R China
[3] Southern Univ Sci & Technol, Dept Biol, Shenzhen 518055, Peoples R China
[4] Chinese Acad Sci, Shenzhen Inst Adv Technol, Shenzhen Hong Kong Inst Brain Sci, CAS Key Lab Hlth Informat,Shenzhen Inst Synthet B, Shenzhen 518055, Peoples R China
基金
中国国家自然科学基金;
关键词
fluorescent protein; circular permutation; cpFP; genetically encoded indicator; GCaMP; IN-VIVO; CALCIUM INDICATORS; NEURAL CIRCUITS; LIVING CELLS; GREEN; PROBE; SENSORS; REDOX; CA2+; BRIGHT;
D O I
10.1088/1361-6463/ab5dd8
中图分类号
O59 [应用物理学];
学科分类号
摘要
Fluorescent protein (FP)-based genetically encoded indicators are valuable tools for reporting signaling activities with high spatial-temporal resolution in living cells and animal models. Thereinto, single circularly permuted FP-based intensity sensors (cpFP sensors or cpFP-based sensors, unless otherwise specified) are of particular interest due to their unprecedented high sensitivity and fast kinetics. In this review, we summarized the recent progress with cpFP sensors, focusing on the practical considerations in sensor development and usage, and categorization of cpFP sensors. We also discuss future directions in improvement of existing sensors, development of new sensors, and functional super-resolution imaging with cpFP sensors.
引用
收藏
页数:22
相关论文
共 50 条
  • [31] cAMP Biosensors Based on Genetically Encoded Fluorescent/Luminescent Proteins
    Kim, Namdoo
    Shin, Seunghan
    Bae, Se Won
    BIOSENSORS-BASEL, 2021, 11 (02):
  • [32] Illuminating the kinome: Visualizing real-time kinase activity in biological systems using genetically encoded fluorescent protein-based biosensors
    Schmitt, Danielle L.
    Mehta, Sohum
    Zhang, Jin
    CURRENT OPINION IN CHEMICAL BIOLOGY, 2020, 54 : 63 - 69
  • [33] Engineering, applications, and future perspectives of GPCR-based genetically encoded fluorescent indicators for neuromodulators
    Rohner, Valentin Lu
    Lamothe-Molina, Paul J.
    Patriarchi, Tommaso
    JOURNAL OF NEUROCHEMISTRY, 2024, 168 (03) : 163 - 184
  • [34] Fluorescent Protein-Based Biosensors and Their Clinical Applications
    Ohba, Yusuke
    Fujioka, Yoichiro
    Nakada, Shigeyuki
    Tsuda, Masumi
    FLUORESCENCE-BASED BIOSENSORS: FROM CONCEPTS TO APPLICATIONS, 2013, 113 : 313 - 348
  • [35] Maximizing the performance of protein-based fluorescent biosensors
    Chai, Fu
    Cheng, Dazhou
    Nasu, Yusuke
    Terai, Takuya
    Campbell, Robert E.
    BIOCHEMICAL SOCIETY TRANSACTIONS, 2023, 51 (04) : 1585 - 1595
  • [36] Designs and applications of fluorescent protein-based biosensors
    Ibraheem, Andreas
    Campbell, Robert E.
    CURRENT OPINION IN CHEMICAL BIOLOGY, 2010, 14 (01) : 30 - 36
  • [37] DEVELOPMENT OF GENETICALLY ENCODED FLUORESCENT PROTEIN CONSTRUCTS OF HYPERTHERMOPHILIC MALTOSE-BINDING PROTEIN
    Ozyurt, Canan
    Evran, Serap
    Telefoncu, Azmi
    PREPARATIVE BIOCHEMISTRY & BIOTECHNOLOGY, 2014, 44 (02) : 132 - 145
  • [38] Red fluorescent genetically encoded Ca2+ indicators for use in mitochondria and endoplasmic reticulum
    Wu, Jiahui
    Prole, David L.
    Shen, Yi
    Lin, Zhihong
    Gnanasekaran, Aswini
    Liu, Yingjie
    Chen, Lidong
    Zhou, Hang
    Cheng, S. R. Wayne
    Usachev, Yuriy M.
    Taylor, Colin W.
    Campbell, Robert E.
    BIOCHEMICAL JOURNAL, 2014, 464 : 13 - 22
  • [39] Structure- and mechanism-guided design of single fluorescent protein-based biosensors
    Nasu, Yusuke
    Shen, Yi
    Kramer, Luke
    Campbell, Robert E.
    NATURE CHEMICAL BIOLOGY, 2021, 17 (05) : 509 - 518
  • [40] Fluorescent Protein-Based Molecular Beacons by Zinc Finger Protein-Guided Assembly
    Blackstock, Daniel
    Sun, Qing
    Chen, Wilfred
    BIOTECHNOLOGY AND BIOENGINEERING, 2015, 112 (02) : 236 - 241