Liquid Crystal Ordering and Isotropic Gelation in Solutions of Four-Base-Long DNA Oligomers

被引:53
作者
Fraccia, Tommaso P. [1 ,5 ]
Smith, Gregory P. [2 ,3 ]
Bethge, Lucas [4 ]
Zanchetta, Giuliano [1 ]
Nava, Giovanni [1 ]
Klussmann, Sven [4 ]
Clark, Noel A. [2 ,3 ]
Bellini, Tommaso [1 ]
机构
[1] Univ Milan, Dipartimento Biotecnol Med & Med Traslaz, Via Fratelli Cervi 93, I-20090 Milan, Italy
[2] Univ Colorado, Dept Phys, Boulder, CO 80309 USA
[3] Univ Colorado, Liquid Crystal Mat Res Ctr, Boulder, CO 80309 USA
[4] NOXXON Pharma AG, Max Dohrn Str 8-10, D-10589 Berlin, Germany
[5] Univ San Raffaele Roma, Dipartimento Sci Umane & Promoz Qualita Vita, Via Val Cannuta 247, I-00166 Rome, Italy
基金
美国国家科学基金会;
关键词
liquid crystals; self-assembly; DNA nanotechnology; origin of life; coaxial stacking of DNA; ABIOTIC LIGATION; NEMATIC PHASES; CRYSTALLIZATION; STACKING; POLYMERS; DYNAMICS; CHAINS;
D O I
10.1021/acsnano.6b03622
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Liquid crystal ordering is reported in aqueous solutions of the oligomer 5'-ATTAp-3' and of the oligomer 5'-GCCGp-3'. In both systems, we quantitatively interpret ordering as stemming from the chaining of molecules via a "running-bond" type of pairing, a self assembly process distinct from the duplex aggregation previously reported for longer oligonucleotides. While concentrated solutions of 5'-ATTAp-3' show only a columnar liquid crystal phase, solutions of 5'-GCCGp-3' display a rich phase diagram, featuring a chiral nematic phase analogous to those observed in solutions of longer oligonucleotides and two unconventional phases, a columnar crystal and, at high concentration, an isotropic amorphous gel. The appearance of these phases, which can be interpreted on the basis of features of 5'-GCCGp-3'molecular structure, suggests distinctive assembly motifs specific to ultrashort oligonucleotides.
引用
收藏
页码:8508 / 8516
页数:9
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