Towards personalized diagnostics via longitudinal study of the human plasma N-glycome

被引:62
作者
Hennig, Rene [1 ,2 ]
Cajic, Samanta [1 ]
Borowiak, Matthias [2 ]
Hoffmann, Marcus [1 ]
Kottler, Robert [1 ]
Reichl, Udo [1 ,3 ]
Rapp, Erdmann [1 ,2 ]
机构
[1] Max Planck Inst Dynam Complex Tech Syst, Sandtorstr 1, D-39106 Magdeburg, Germany
[2] glyXera GmbH, Leipziger Str 44, D-39120 Magdeburg, Germany
[3] Otto Von Guericke Univ, Chair Bioproc Engn, Univ Pl 2, D-39106 Magdeburg, Germany
来源
BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS | 2016年 / 1860卷 / 08期
关键词
Glycomics; N-glycosylation; xCGE-LIF; Long-term stability; Longitudinal study; Personalized diagnostics; THROUGHPUT GLYCOSYLATION ANALYSIS; CAPILLARY GEL-ELECTROPHORESIS; IMMUNOGLOBULIN-G; STRUCTURAL-CHANGES; PANCREATIC-CANCER; SERUM-PROTEINS; GLYCANS; OLIGOSACCHARIDES; GALACTOSYLATION; IGG;
D O I
10.1016/j.bbagen.2016.03.035
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Facilitated by substantial advances in analytical methods, plasma N-glycans have emerged as potential candidates for biomarkers. In the recent years, several investigations could link aberrant plasma N-glycosylation to numerous diseases. However, due to often limited specificity and sensitivity, only a very limited number of glycan biomarkers were approved by the authorities up to now. The inter-individual heterogeneity of the plasma N-glycomes might mask disease related changes in conventional large cross-sectional cohort studies, with a one-time sampling approach. But, a possible benefit of longitudinal sampling in biomarker discovery could be, that already small changes during disease progression are revealed, by monitoring the plasma N-glycome of individuals over time. To evaluate this, we collected blood plasma samples of five healthy donors over a time period of up to six years (min. 1.5 years). The plasma N-glycome was analyzed by xCGE-LIF, to investigate the intra-individual N-glycome variability over time. It is shown, that the plasma N-glycome of an individual is remarkably stable over a period of several years, and that observed small longitudinal changes are independent from seasons, but significantly correlated with lifestyle and environmental factors. Thus, the potential of future longitudinal biomarker discovery studies could be demonstrated, which is a further step towards personalized diagnostics. This article is part of a Special Issue entitled "Glycans in personalised medicine" Guest Editor: Professor Gordan Lauc. (C) 2016 The Authors. Published by Elsevier B.V.
引用
收藏
页码:1728 / 1738
页数:11
相关论文
共 65 条
[1]   A strategy to reveal potential glycan markers from serum glycoproteins associated with breast cancer progression [J].
Abd Hamid, Umi M. ;
Royle, Louise ;
Saldova, Radka ;
Radcliffe, Catherine M. ;
Harvey, David J. ;
Storr, Sarah J. ;
Pardo, Maria ;
Antrobus, Robin ;
Chapman, Caroline J. ;
Zitzmann, Nicole ;
Robertson, John F. ;
Dwek, Raymond A. ;
Rudd, Pauline M. .
GLYCOBIOLOGY, 2008, 18 (12) :1105-1118
[2]   Glycans as cancer biomarkers [J].
Adamczyk, Barbara ;
Tharmalingam, Tharmala ;
Rudd, Pauline M. .
BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS, 2012, 1820 (09) :1347-1353
[3]   Glycosylation as a marker for inflammatory arthritis [J].
Albrecht, Simone ;
Unwin, Louise ;
Muniyappa, Mohankumar ;
Rudd, Pauline M. .
CANCER BIOMARKERS, 2014, 14 (01) :17-28
[4]  
Almeida A., BIOCH BIOPHYSICA ACT
[5]   Novel Glycan Biomarkers for the Detection of Lung Cancer [J].
Arnold, James N. ;
Saldova, Radka ;
Galligan, Marie C. ;
Murphy, Thomas B. ;
Mimura-Kimura, Yuka ;
Telford, Jayne E. ;
Godwin, Andrew K. ;
Rudd, Pauline M. .
JOURNAL OF PROTEOME RESEARCH, 2011, 10 (04) :1755-1764
[6]   Association between Galactosylation of Immunoglobulin G and Improvement of Rheumatoid Arthritis during Pregnancy Is Independent of Sialylation [J].
Bondt, Albert ;
Selman, Maurice H. J. ;
Deelder, Andre M. ;
Hazes, Johanna M. W. ;
Willemsen, Sten P. ;
Wuhrer, Manfred ;
Dolhain, Radboud J. E. M. .
JOURNAL OF PROTEOME RESEARCH, 2013, 12 (10) :4522-4531
[7]   Glycomic and Glycoproteomic Analysis of Serum from Patients with Stomach Cancer Reveals Potential Markers Arising from Host Defense Response Mechanisms [J].
Bones, Jonathan ;
Byrne, Jennifer C. ;
O'Donoghue, Niaobh ;
McManus, Ciara ;
Scaife, Caitriona ;
Boissin, Herve ;
Nastase, Anca ;
Rudd, Pauline M. .
JOURNAL OF PROTEOME RESEARCH, 2011, 10 (03) :1246-1265
[8]   Plasma N-Glycome Signature of Down Syndrome [J].
Borelli, Vincenzo ;
Vanhooren, Valerie ;
Lonardi, Emanuela ;
Reiding, Karli R. ;
Capri, Miriam ;
Libert, Claude ;
Garagnani, Paolo ;
Salvioli, Stefano ;
Franceschi, Claudio ;
Wuhrer, Manfred .
JOURNAL OF PROTEOME RESEARCH, 2015, 14 (10) :4232-4245
[9]   ALPHA-1-ANTITRYPSIN AND THE SERPINS - VARIATION AND COUNTERVARIATION [J].
CARRELL, R ;
TRAVIS, J .
TRENDS IN BIOCHEMICAL SCIENCES, 1985, 10 (01) :20-24
[10]  
Clerc F., 2015, GLYCOCONJ J