Learning representations for the early detection of sepsis with deep neural networks

被引:146
作者
Kam, Hye Jin [1 ]
Kim, Ha Young [2 ]
机构
[1] Asan Med Ctr, Asan Inst Life Sci, Hlth Innovat Bigdata Ctr, 88,Olymp Ro 43 Gil, Seoul 05505, South Korea
[2] Ajou Univ, Sch Business, Dept Financial Engn, Worldcupro 206, Suwon 16499, South Korea
关键词
Sepsis; Early detection; Deep learning; Clinical decision support system; Feature extraction; LSTM; Multivariate time-series; SEPTIC SHOCK; PREDICTION; CLASSIFICATION;
D O I
10.1016/j.compbiomed.2017.08.015
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Background: Sepsis is one of the leading causes of death in intensive care unit patients. Early detection of sepsis is vital because mortality increases.as the sepsis stage worsens. Objective: This study aimed to develop detection models for the early stage of sepsis using deep learning methodologies, and to compare the feasibility and performance of the new deep learning methodology with those of the regression method with conventional temporal feature extraction. Method: Study group selection adhered to the Insight model. The results of the deep learning-based models and the Insight model were compared. Results: With deep feedforward networks, the area under the ROC curve (AUC) of the models were 0.887 and 0.915 for the InSight and the new feature sets, respectively. For the model with the combined feature set, the AUC was the same as that of the basic feature set (0.915). For the long short-term memory model, only the basic feature set was applied and the AUC improved to 0.929 compared with the existing 0.887 of the InSight model. Conclusions: The contributions of this paper can be summarized in three ways: (i) improved performance without feature extraction using domain knowledge, (ii) verification of feature extraction capability of deep neural networks through comparison with reference features, and (iii) improved performance with feedforward neural networks using long short-term memory, a neural network architecture that can learn sequential patterns.
引用
收藏
页码:248 / 255
页数:8
相关论文
共 50 条
[1]  
ABADI M, 2015, TENSORFLOW LARGE SCA, DOI DOI 10.48550/ARXIV.1605.08695
[2]   Epidemiology of severe sepsis in the United States: Analysis of incidence, outcome, and associated costs of care [J].
Angus, DC ;
Linde-Zwirble, WT ;
Lidicker, J ;
Clermont, G ;
Carcillo, J ;
Pinsky, MR .
CRITICAL CARE MEDICINE, 2001, 29 (07) :1303-1310
[3]  
[Anonymous], 2016, P ADV NEURAL INFORM
[4]  
[Anonymous], 2007, Scholarpedia, DOI DOI 10.4249/SCHOLARPEDIA.2330
[5]  
[Anonymous], 2010, TECHNICAL REPORT
[6]   On Pixel-Wise Explanations for Non-Linear Classifier Decisions by Layer-Wise Relevance Propagation [J].
Bach, Sebastian ;
Binder, Alexander ;
Montavon, Gregoire ;
Klauschen, Frederick ;
Mueller, Klaus-Robert ;
Samek, Wojciech .
PLOS ONE, 2015, 10 (07)
[7]   Representation Learning: A Review and New Perspectives [J].
Bengio, Yoshua ;
Courville, Aaron ;
Vincent, Pascal .
IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE, 2013, 35 (08) :1798-1828
[8]  
Bone R C., 1992, Chest, V101
[9]   Monitoring and Identification of Sepsis Development through a Composite Measure of Heart Rate Variability [J].
Bravi, Andrea ;
Green, Geoffrey ;
Longtin, Andre ;
Seely, Andrew J. E. .
PLOS ONE, 2012, 7 (09)
[10]   A computational approach to early sepsis detection [J].
Calvert, Jacob S. ;
Price, Daniel A. ;
Chettipally, Uli K. ;
Barton, Christopher W. ;
Feldman, Mitchell D. ;
Hoffman, Jana L. ;
Jay, Melissa ;
Das, Ritankar .
COMPUTERS IN BIOLOGY AND MEDICINE, 2016, 74 :69-73