Cryo-EM: A Unique Tool for the Visualization of Macromolecular Complexity

被引:262
作者
Nogales, Eva [1 ,2 ,3 ]
Scheres, Sjors H. W. [4 ]
机构
[1] Univ Calif Berkeley, Mol & Cell Biol Dept, Berkeley, CA 94720 USA
[2] Univ Calif Berkeley, Howard Hughes Med Inst, Berkeley, CA 94720 USA
[3] Univ Calif Berkeley, Lawrence Berkeley Natl Lab, Div Life Sci, Berkeley, CA 94720 USA
[4] MRC Lab Mol Biol, Cambridge CB2 0QH, England
基金
英国医学研究理事会;
关键词
RNA-POLYMERASE-II; TRANSMISSION ELECTRON-MICROSCOPY; LIKELIHOOD-BASED CLASSIFICATION; SINGLE-PARTICLE ANALYSIS; GAMMA-SECRETASE COMPLEX; LARGE RIBOSOMAL-SUBUNIT; BEAM-INDUCED MOTION; ALPHA-BETA-TUBULIN; CRYOELECTRON MICROSCOPY; ANGSTROM RESOLUTION;
D O I
10.1016/j.molcel.2015.02.019
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
3D cryo-electron microscopy (cryo-EM) is an expanding structural biology technique that has recently undergone a quantum leap progression in its achievable resolution and its applicability to the study of challenging biological systems. Because crystallization is not required, only small amounts of sample are needed, and because images can be classified in a computer, the technique has the potential to deal with compositional and conformational mixtures. Therefore, cryo-EM can be used to investigate complete and fully functional macromolecular complexes in different functional states, providing a richness of biological insight. In this review, we underlie some of the principles behind the cryo-EM methodology of single particle analysis and discuss some recent results of its application to challenging systems of paramount biological importance. We place special emphasis on new methodological developments that are leading to an explosion of new studies, many of which are reaching resolutions that could only be dreamed of just a couple of years ago.
引用
收藏
页码:677 / 689
页数:13
相关论文
共 100 条
[91]   EMAN2: An extensible image processing suite for electron microscopy [J].
Tang, Guang ;
Peng, Liwei ;
Baldwin, Philip R. ;
Mann, Deepinder S. ;
Jiang, Wen ;
Rees, Ian ;
Ludtke, Steven J. .
JOURNAL OF STRUCTURAL BIOLOGY, 2007, 157 (01) :38-46
[92]   ELECTRON-MICROSCOPY OF FROZEN HYDRATED BIOLOGICAL SPECIMENS [J].
TAYLOR, KA ;
GLAESER, RM .
JOURNAL OF ULTRASTRUCTURE RESEARCH, 1976, 55 (03) :448-456
[93]   Structural basis of preinitiation complex assembly on human Pol II promoters [J].
Tsai, FTF ;
Sigler, PB .
EMBO JOURNAL, 2000, 19 (01) :25-36
[94]   ACETYLCHOLINE-RECEPTOR CHANNEL IMAGED IN THE OPEN STATE [J].
UNWIN, N .
NATURE, 1995, 373 (6509) :37-43
[95]   Cryo-EM reveals an active role for aminoacyl-tRNA in the accommodation process [J].
Valle, M ;
Sengupta, J ;
Swami, NK ;
Grassucci, RA ;
Burkhardt, N ;
Nierhaus, KH ;
Agrawal, RK ;
Frank, J .
EMBO JOURNAL, 2002, 21 (13) :3557-3567
[96]   ANGULAR RECONSTITUTION - A POSTERIORI ASSIGNMENT OF PROJECTION DIRECTIONS FOR 3-D RECONSTRUCTION [J].
VANHEEL, M .
ULTRAMICROSCOPY, 1987, 21 (02) :111-123
[97]   A new generation of the IMAGIC image processing system [J].
vanHeel, M ;
Harauz, G ;
Orlova, EV ;
Schmidt, R ;
Schatz, M .
JOURNAL OF STRUCTURAL BIOLOGY, 1996, 116 (01) :17-24
[98]   Structure of the Mammalian Ribosome-Sec61 Complex to 3.4 Å Resolution [J].
Voorhees, Rebecca M. ;
Fernandez, Israel S. ;
Scheres, Sjors H. W. ;
Hegde, Ramanujan S. .
CELL, 2014, 157 (07) :1632-1643
[99]   An atomic model of brome mosaic virus using direct electron detection and real-space optimization [J].
Wang, Zhao ;
Hryc, Corey F. ;
Bammes, Benjamin ;
Afonine, Pavel V. ;
Jakana, Joanita ;
Chen, Dong-Hua ;
Liu, Xiangan ;
Baker, Matthew L. ;
Kao, Cheng ;
Ludtke, Steven J. ;
Schmid, Michael F. ;
Adams, Paul D. ;
Chiu, Wah .
NATURE COMMUNICATIONS, 2014, 5
[100]   Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine [J].
Wong, Wilson ;
Bai, Xiao-chen ;
Brown, Alan ;
Fernandez, Israel S. ;
Hanssen, Eric ;
Condron, Melanie ;
Tan, Yan Hong ;
Baum, Jake ;
Scheres, Sjors H. W. .
ELIFE, 2014, 3