Immune-Related lncRNAs Pairs to Construct a Novel Signature for Predicting Prognosis in Gastric Cancer

被引:0
作者
Bao, Tianshang [1 ]
Wang, Zeyu [1 ]
Xu, Jia [1 ]
机构
[1] Shanghai Jiao Tong Univ, Renji Hosp, Sch Med, Dept Gastrointestinal Surg, Shanghai, Peoples R China
关键词
checkpoint blockade therapy; gastric cancer (GC); long non-coding RNA; TCGA; tumor-infiltrating immune cell; LONG NONCODING RNA; PROLIFERATION; METASTASIS;
D O I
10.3389/fsurg.2022.807778
中图分类号
R61 [外科手术学];
学科分类号
摘要
BackgroundImmune-related long non-coding RNAs (irlncRNAs) appear valuable in predicting prognosis in patients with cancer. In this study, we used a fresh modeling algorithm to construct irlncRNAs signature and then assessed its predictive value for prognosis, tumor immune infiltration, and chemotherapy efficacy in gastric cancer (GC) patients. Materials and MethodsThe raw transcriptome data were extracted from the Cancer Genome Atlas (TCGA). Patients were randomly divided into the training and testing cohort. irlncRNAs were identified through co-expression analysis, after which differentially expressed irlncRNA (DEirlncRNA) pairs were identified. Next, we developed a model to distinguish between high- or low-risk groups in GC patients through univariate and LASSO regression analyses. A ROC curve was used to verify this model. After subgrouping patients according to the median risk score, we investigated the connection between the risk score of GC and clinicopathological characteristics. Functional enrichment analysis was also performed. ResultsWe find that the results indicate that immune-related lncRNA signaling has essential value in predicting prognosis, and it may be potential to measure the Efficacy for immunotherapy. This feature may be a guide to the selection of GC immunotherapy. ConclusionOur data revealed that immune-related lncRNA signaling had essential value in predicting prognosis, and it may be potentially used to measure the efficacy for immunotherapy. This feature may also be used to guide the selection of GC immunotherapy.
引用
收藏
页数:14
相关论文
共 41 条
[1]   Tumor Microenvironment [J].
Arneth, Borros .
MEDICINA-LITHUANIA, 2020, 56 (01)
[2]   CAR-T Cell Therapy-An Overview of Targets in Gastric Cancer [J].
Bebnowska, Dominika ;
Grywalska, Ewelina ;
Niedzwiedzka-Rystwej, Paulina ;
Sosnowska-Pasiarska, Barbara ;
Smok-Kalwat, Jolanta ;
Pasiarski, Marcin ;
Gozdz, Stanislaw ;
Rolinski, Jacek ;
Polkowski, Wojciech .
JOURNAL OF CLINICAL MEDICINE, 2020, 9 (06) :1-15
[3]   Long Noncoding RNA and Cancer: A New Paradigm [J].
Bhan, Arunoday ;
Soleimani, Milad ;
Mandal, Subhrangsu S. .
CANCER RESEARCH, 2017, 77 (15) :3965-3981
[4]   Long noncoding RNAs and cancer, an overview [J].
Camacho, Cristel V. ;
Choudhari, Ramesh ;
Gadad, Shrikanth S. .
STEROIDS, 2018, 133 :93-95
[5]   Immune-related long non-coding RNA signature identified prognosis and immunotherapeutic efficiency in bladder cancer (BLCA) [J].
Cao, Rui ;
Yuan, Lushun ;
Ma, Bo ;
Wang, Gang ;
Tian, Ye .
CANCER CELL INTERNATIONAL, 2020, 20 (01)
[6]   Expression and correlation of MALAT1 and SOX9 in non-small cell lung cancer [J].
Chen, Wei ;
Zhao, Wei ;
Chen, Sheng ;
Zhang, Li ;
Guo, Zhongying ;
Wang, Lixin ;
Wang, Jipeng ;
Wan, Zongren ;
Hong, Yongqing ;
Yu, Liang .
CLINICAL RESPIRATORY JOURNAL, 2018, 12 (07) :2284-2291
[7]   Long Non-Coding RNA in the Pathogenesis of Cancers [J].
Chi, Yujing ;
Wang, Di ;
Wang, Junpei ;
Yu, Weidong ;
Yang, Jichun .
CELLS, 2019, 8 (09)
[8]   Immunotherapy in advanced gastric cancer, is it the future? [J].
Coutzac, C. ;
Pernot, S. ;
Chaput, N. ;
Zaanan, A. .
CRITICAL REVIEWS IN ONCOLOGY HEMATOLOGY, 2019, 133 :25-32
[9]   Advanced gastric cancer: Current treatment landscape and future perspectives [J].
Digklia, Antonia ;
Wagner, Anna Dorothea .
WORLD JOURNAL OF GASTROENTEROLOGY, 2016, 22 (08) :2403-2414
[10]   LncRNAs as potential diagnostic and prognostic biomarkers in gastric cancer: A novel approach to personalized medicine [J].
Fattahi, Sadegh ;
Kosari-Monfared, Mohadeseh ;
Golpour, Monireh ;
Emami, Zakieh ;
Ghasemiyan, Mohammad ;
Nour, Maryam ;
Akhavan-Niaki, Haleh .
JOURNAL OF CELLULAR PHYSIOLOGY, 2020, 235 (04) :3189-3206