Oceaniglobus indicus gen. nov., sp nov., a member of the family Rhodobacteraceae isolated from surface seawater

被引:9
作者
Li, Jianyang [1 ,2 ]
Huang, Zhaobin [1 ]
Lai, Qiliang [1 ]
Liu, Xiupian [1 ]
Wang, Guangyi [2 ]
Shao, Zongze [1 ,3 ]
机构
[1] SOA, South China Sea Bioresource Exploitat & Utilizat, Fujian Collaborat Innovat Ctr Marine Biol Resourc, Key Lab Marine Genet Resources,Fujian Key Lab Mar, Xiamen 361005, Peoples R China
[2] Tianjin Univ, Sch Environm Sci & Engn, Tianjin 300387, Peoples R China
[3] Qingdao Natl Lab Marine Sci & Technol, Lab Marine Biol & Biotechnol, Qingdao, Peoples R China
关键词
Oceaniglobus indicus; taxonomy; Indian ocean; DEEP-SEA SEDIMENT; SEQUENCE; TREES;
D O I
10.1099/ijsem.0.002275
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Gram-stain-negative, non-motile, aerobic and heterotrophic strain, designated 1-19b(T), was isolated from surface seawater in the Indian Ocean. The cells were ovoid or coccus (0.8-1.0 mu m in diameter) with no flagellum. Activities of catalase and oxidase were positive. Growth was observed at salinity of 0.5-10 (% NaCl, w/v) with an optimum of 3-4, at pH 5-10 with an optimum of 7-8, and at 5-37 degrees C with an optimum of 28-35 degrees C. It accumulated poly-beta-hydroxybutyrate granules inside the cell. Bacteriochlorophyll a was absent. The respiratory quinone was Q-10 and the dominant fatty acid was summed feature 8 (C-18 : 1 omega 7c and/or C-18 : 1 omega 6c). The major polar lipids comprised phosphatidylcholine, phosphatidylglycerol, phosphatidylethanolamine, diphosphatidylglycerol, an unidentified phospholipid and two unidentified polar lipids. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain 1-19b(T) belonged to the family Rhodobacteraceae and formed a distinct monophyletic clade with 'Oceaniovalibus guishaninsula' JLT2003 and Pontibaca methylaminivorans GRP21(T), exhibiting similarities of 94.7 and 92.2 %, respectively. The genomic DNA G+C content was 64.2 mol%. Based on the phenotypic, chemotaxonomic and genotypic data, strain 1-19b(T) represents a novel species in a new genus of the family Rhodobacteraceae, for which the name Oceaniglobus indicus gen. nov., sp. nov. is proposed, with the type strain 1-19b(T) (=MCCC 1A11863(T) =KCTC 52709(T)).
引用
收藏
页码:4930 / 4935
页数:6
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