Specific, simple and rapid detection of porcine circovirus type 2 using the loop-mediated isothermal amplification method

被引:25
作者
Zhao, Kai [1 ,3 ]
Shi, Wei [4 ]
Han, Fangting [4 ]
Xu, Yan [4 ]
Zhu, Lianlong [1 ,3 ]
Zou, Yong [2 ,3 ]
Wu, Xiao [1 ,3 ]
Zhu, Hong [1 ,3 ]
Tan, Furong [1 ,3 ]
Tao, Shiru [1 ,3 ]
Tang, Xueming [1 ,3 ]
机构
[1] Shanghai Acad Agr Sci, Biotechnol Res Inst, Shanghai 201106, Peoples R China
[2] Shanghai Acad Agr Sci, Inst Anim Sci & Vet Med, Shanghai 201106, Peoples R China
[3] Shanghai Acad Agr Sci, Key Lab Agr Genet & Breeding, Shanghai 201106, Peoples R China
[4] Shanghai Normal Univ, Coll Life & Environm Sci, Shanghai 200234, Peoples R China
关键词
MULTISYSTEMIC WASTING SYNDROME; REAL-TIME PCR; VIRUS; QUANTITATION; DNA; H5;
D O I
10.1186/1743-422X-8-126
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Background: Porcine circovirus type 2 (PCV2) is the causative agent of postweaning multisystemic wasting syndrome (PMWS), and porcine dermatitis and nephropathy syndrome (PDNS). It has caused heavy losses in global agriculture in recent decades. Rapid detection of PCV2 is very important for the effective prophylaxis and treatment of PMWS. Results: A loop-mediated isothermal amplification (LAMP) assay was used to detect PCV2 in this study. Three pairs of primers were specially designed for recognizing eight distinct sequences of the ORF2 gene. This gene lies in the PCV2 virus genome sequence, and encodes the Rep protein that is involved in virus replication. Time and temperature conditions for amplification of PCV2 genes were optimized to be 55 min at 59 degrees C. The analysis of clinical samples indicated that the LAMP method was highly sensitive. The detection limit for PCV2 by the LAMP assay was 10 copies, whereas the limit by conventional PCR was 1000 copies. The assay did not cross-react with PCV1, porcine reproductive and respiratory syndrome virus, porcine epidemic diarrhea virus, transmissible gastroenteritis of pigs virus or rotavirus. When 110 samples were tested using the established LAMP system, 95 were detected as positive. Conclusion: The newly developed LAMP detection method for PCV2 was more specific, sensitive, rapid and simple than before. It complements and extends previous methods for PCV2 detection and provides an alternative approach for detection of PCV2.
引用
收藏
页数:7
相关论文
共 50 条
  • [31] Sensitive and rapid detection of Alicyclobacillus acidoterrestris using loop-mediated isothermal amplification
    Chen, Jing
    Ma, Xiaoyan
    Yuan, Yaowu
    Zhang, Wei
    JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE, 2011, 91 (06) : 1070 - 1074
  • [32] Rapid detection of Colletotrichum gloeosporioides using a loop-mediated isothermal amplification assay
    Wang, Shuaishuai
    Ye, Wenwu
    Tian, Qing
    Dong, Suomeng
    Zheng, Xiaobo
    AUSTRALASIAN PLANT PATHOLOGY, 2017, 46 (05) : 493 - 498
  • [33] Real time loop-mediated isothermal amplification using a portable fluorescence scanner for rapid and simple detection of Vibrio parahaemolyticus
    Yi, MinYing
    Ling, Li
    Neogi, Sucharit B.
    Fan, YaoSen
    Tang, Dayun
    Yamasaki, Shinji
    Shi, Lei
    Ye, Lei
    FOOD CONTROL, 2014, 41 : 91 - 95
  • [34] A novel and rapid loop-mediated isothermal amplification assay for the specific detection of Verticillium dahliae
    Moradi, A.
    Almasi, M. A.
    Jafary, H.
    Mercado-Blanco, J.
    JOURNAL OF APPLIED MICROBIOLOGY, 2014, 116 (04) : 942 - 954
  • [35] Development of a loop-mediated isothermal amplification assay for the detection of porcine hokovirus
    Li, Bin
    Sun, Bing
    Du, Lu-ping
    Mao, Ai-hua
    Wen, Li-bin
    Ni, Yan-xiu
    Zhang, Xue-han
    He, Kong-wang
    JOURNAL OF VIROLOGICAL METHODS, 2013, 193 (02) : 415 - 418
  • [36] Application of a loop-mediated isothermal amplification method for the detection of pathogenic Leptospira
    Lin, Xu'ai
    Chen, Yin
    Lu, Yiyu
    Yan, Juying
    Yan, Jie
    DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE, 2009, 63 (03) : 237 - 242
  • [37] Development and Application of a Rapid and Simple Loop-mediated Isothermal Amplification Method for Food-borne Salmonella Detection
    Zhao, Xihong
    Wang, Li
    Chu, Jin
    Li, Yanmei
    Li, Yanyan
    Xu, Zhenbo
    Li, Lin
    Shirtliff, Mark E.
    He, Xiaowei
    Liu, Yao
    Wang, Jihua
    Yang, Liansheng
    FOOD SCIENCE AND BIOTECHNOLOGY, 2010, 19 (06) : 1655 - 1659
  • [38] Rapid detection of fowl adenovirus field samples using loop-mediated isothermal amplification assay
    Parthiban, M.
    Shalini, K. S.
    Divya, Kurunchi C.
    Kumanan, K.
    Aarthi, K. S.
    INDIAN JOURNAL OF ANIMAL SCIENCES, 2014, 84 (01) : 22 - 25
  • [39] Rapid detection of Colletotrichum gloeosporioides in infected strawberry plants using loop-mediated isothermal amplification
    Katoh, Hiroshi
    Fukuda, Takashi
    Nishigawa, Hisashi
    Natsuaki, Tomohide
    JOURNAL OF GENERAL PLANT PATHOLOGY, 2016, 82 (04) : 190 - 198
  • [40] Rapid detection of Trichinella spiralis larvae in muscles by loop-mediated isothermal amplification
    Li, Xuelian
    Liu, Wei
    Wang, Jie
    Zou, Dayang
    Wang, Xuesong
    Yang, Zhan
    Yin, Zhitao
    Cui, Qian
    Shang, Wei
    Li, Huan
    Wei, Xiao
    Cui, Jing
    Wang, Zhongquan
    Huang, Liuyu
    Yuan, Jing
    INTERNATIONAL JOURNAL FOR PARASITOLOGY, 2012, 42 (13-14) : 1119 - 1126