Broadly neutralizing human antibodies against dengue virus identified by single B cell transcriptomics

被引:39
作者
Durham, Natasha D. [1 ,10 ]
Agrawal, Aditi [1 ]
Waltari, Eric [1 ]
Croote, Derek [2 ]
Zanini, Fabio [2 ,11 ]
Fouch, Mallorie [3 ]
Davidson, Edgar [3 ]
Smith, Olivia [1 ]
Carabajal, Esteban [1 ]
Pak, John E. [1 ]
Doranz, Benjamin J. [3 ]
Robinson, Makeda [4 ,5 ]
Sanz, Ana M. [6 ]
Albornoz, Ludwig L. [7 ]
Rosso, Fernando [6 ,8 ]
Einav, Shirit [4 ,5 ]
Quake, Stephen R. [1 ,2 ]
McCutcheon, Krista M. [1 ]
Goo, Leslie [1 ,9 ]
机构
[1] Chan Zuckerberg Biohub, San Francisco, CA 94158 USA
[2] Stanford Univ, Dept Bioengn, Stanford, CA 94305 USA
[3] Integral Mol Inc, Philadelphia, PA USA
[4] Stanford Univ, Dept Med, Sch Med, Div Infect Dis & Geog Med, Stanford, CA 94305 USA
[5] Stanford Univ, Dept Microbiol & Immunol, Sch Med, Stanford, CA 94305 USA
[6] Fdn Valle Lili, Clin Res Ctr, Cali, Colombia
[7] Fdn Valle Lili, Pathol & Lab Dept, Cali, Colombia
[8] Fdn Valle Lili, Div Infect Dis, Dept Internal Med, Cali, Colombia
[9] Fred Hutchinson Canc Res Ctr, Vaccine & Infect Dis Div, 1124 Columbia St, Seattle, WA 98104 USA
[10] Univ Massachusetts, Med Sch, Dept Microbiol & Physiol Syst, Worcester, MA 01605 USA
[11] Univ New South Wales, Lowy Canc Res Ctr, Kensington, NSW, Australia
来源
ELIFE | 2019年 / 8卷
基金
美国国家科学基金会; 美国国家卫生研究院;
关键词
WEST-NILE-VIRUS; HUMAN MONOCLONAL-ANTIBODIES; ZIKA VIRUS; STRUCTURAL BASIS; MEDIATED NEUTRALIZATION; DEPENDENT ENHANCEMENT; HEMORRHAGIC-FEVER; SEROTYPES; INFECTION; VACCINE;
D O I
10.7554/eLife.52384
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Eliciting broadly neutralizing antibodies (bNAbs) against the four dengue virus serotypes (DENV1-4) that are spreading into new territories is an important goal of vaccine design. To define bNAb targets, we characterized 28 antibodies belonging to expanded and hypermutated clonal families identified by transcriptomic analysis of single plasmablasts from DENV-infected individuals. Among these, we identified J9 and J8, two somatically related bNAbs that potently neutralized DENV1-4. Mutagenesis studies showed that the major recognition determinants of these bNAbs are in E protein domain I, distinct from the only known class of human bNAbs against DENV with a well-defined epitope. B cell repertoire analysis from acute-phase peripheral blood suggested that J9 and J8 followed divergent somatic hypermutation pathways, and that a limited number of mutations was sufficient for neutralizing activity. Our study suggests multiple B cell evolutionary pathways leading to DENV bNAbs targeting a new epitope that can be exploited for vaccine design.
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页数:29
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共 115 条
  • [1] Dengue hemorrhagic fever caused by sequential dengue 1-3 virus infections over a long time interval:: Havana epidemic, 2001-2002
    Alvarez, Mayling
    Rodriguez-Roche, Rosmari
    Bernardo, Lidice
    Vazquez, Susana
    Morier, Luis
    Gonzalez, Daniel
    Castro, Osvaldo
    Kouri, Gustavo
    Halstead, Scott B.
    Guzman, Maria G.
    [J]. AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE, 2006, 75 (06) : 1113 - 1117
  • [2] Temperature-dependent production of pseudoinfectious dengue reporter virus particles by complementation
    Ansarah-Sobrinho, Camilo
    Nelson, Steevenson
    Jost, Christiane A.
    Whitehead, Stephen S.
    Pierson, Theodore C.
    [J]. VIROLOGY, 2008, 381 (01) : 67 - 74
  • [3] Plasmablasts During Acute Dengue Infection Represent a Small Subset of a Broader Virus-specific Memory B Cell Pool
    Appanna, Ramapraba
    Srinivasan, K. G.
    Xu, Mei Hui
    Toh, Ying-Xiu
    Velumani, Sumathy
    Carbajo, Daniel
    Lee, Chia Yin
    Zuest, Roland
    Balakrishnan, Thavamalar
    Xu, Weili
    Lee, Bernett
    Poidinger, Michael
    Zolezzi, Francesca
    Leo, Yee Sin
    Thein, Tun Linn
    Wang, Cheng-, I
    Fink, Katja
    [J]. EBIOMEDICINE, 2016, 12 : 178 - 188
  • [4] Structural basis of potent Zika-dengue virus antibody cross-neutralization
    Barba-Spaeth, Giovanna
    Dejnirattisai, Wanwisa
    Rouvinski, Alexander
    Vaney, Marie-Christine
    Medits, Iris
    Sharma, Arvind
    Simon-Loriere, Etienne
    Sakuntabhai, Anavaj
    Cao-Lormeau, Van-Mai
    Haouz, Ahmed
    England, Patrick
    Stiasny, Karin
    Mongkolsapaya, Juthathip
    Heinz, Franz X.
    Screaton, Gavin R.
    Rey, Felix A.
    [J]. NATURE, 2016, 536 (7614) : 48 - +
  • [5] Dengue genetic divergence generates within-serotype antigenic variation, but serotypes dominate evolutionary dynamics
    Bell, Sidney M.
    Katzelnick, Leah
    Bedford, Trevor
    [J]. ELIFE, 2019, 8
  • [6] The global distribution and burden of dengue
    Bhatt, Samir
    Gething, Peter W.
    Brady, Oliver J.
    Messina, Jane P.
    Farlow, Andrew W.
    Moyes, Catherine L.
    Drake, John M.
    Brownstein, John S.
    Hoen, Anne G.
    Sankoh, Osman
    Myers, Monica F.
    George, Dylan B.
    Jaenisch, Thomas
    Wint, G. R. William
    Simmons, Cameron P.
    Scott, Thomas W.
    Farrar, Jeremy J.
    Hay, Simon I.
    [J]. NATURE, 2013, 496 (7446) : 504 - 507
  • [7] Sequential dengue virus infections detected in active and passive surveillance programs in Thailand, 1994-2010
    Bhoomiboonchoo, Piraya
    Nisalak, Ananda
    Chansatiporn, Natkamol
    Yoon, In-Kyu
    Kalayanarooj, Siripen
    Thipayamongkolgul, Mathuros
    Endy, Timothy
    Rothman, Alan L.
    Green, Sharone
    Srikiatkhachorn, Anon
    Buddhari, Darunee
    Mammen, Mammen P.
    Gibbons, Robert V.
    [J]. BMC PUBLIC HEALTH, 2015, 15
  • [8] Efficacy of a Tetravalent Dengue Vaccine in Healthy Children and Adolescents
    Biswal, Shibadas
    Reynales, Humberto
    Saez-Llorens, Xavier
    Lopez, Pio
    Borja-Tabora, Charissa
    Kosalaraksa, Pope
    Sirivichayakul, Chukiat
    Watanaveeradej, Veerachai
    Rivera, Luis
    Espinoza, Felix
    Fernando, LakKumar
    Dietze, Reynaldo
    Luz, Kleber
    da Cunha, Rivaldo Venancio
    Jimeno, Jose
    Lopez-Medina, Eduardo
    Borkowski, Astrid
    Brose, Manja
    Rauscher, Martina
    LeFevre, Inge
    Bizjajeva, Svetlana
    Bravo, Lulu
    Wallace, Derek
    [J]. NEW ENGLAND JOURNAL OF MEDICINE, 2019, 381 (21) : 2009 - 2019
  • [9] Techniques to Study Antigen-Specific B Cell Responses
    Boonyaratanakornkit, Jim
    Taylor, Justin J.
    [J]. FRONTIERS IN IMMUNOLOGY, 2019, 10 : 1694
  • [10] Animal models for studying dengue pathogenesis and therapy
    Chan, Kitti Wing Ki
    Watanabe, Satoru
    Kavishna, Ranmali
    Alonso, Sylvie
    Vasudevan, Subhash G.
    [J]. ANTIVIRAL RESEARCH, 2015, 123 : 5 - 14