Pelagivirga sediminicola gen. nov., sp nov isolated from the Bohai Sea

被引:10
作者
Ji, Xiaofei [1 ]
Zhang, Cong [2 ]
Zhang, Xiying [3 ]
Xu, Zheng [1 ]
Ding, Yunfei [1 ]
Zhang, Yimei [1 ]
Song, Qing [1 ]
Li, Boqing [1 ]
Zhao, Huilin [1 ]
机构
[1] Binzhou Med Univ, Sch Basic Med Sci, Dept Pathogen Biol, Yantai, Peoples R China
[2] Qingdao Agr Univ, Sch Life Sci, Shandong Prov Key Lab Appl Mycol, Qingdao, Peoples R China
[3] Shandong Univ, Marine Biotechnol Res Ctr, State Key Lab Microbial Technol, Jinan, Shandong, Peoples R China
基金
中国国家自然科学基金;
关键词
marine sediment; polyphasic taxonomic; novel genus; Pelagivirga sediminicola gen. nov; sp nov; MEMBER;
D O I
10.1099/ijsem.0.003015
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Gram-stain-negative bacterium, strain BH-SD19(T), that was isolated from a marine sediment sample collected from the Bohai Sea, was subjected to a polyphasic taxonomic study. Cells of BH-SD19(T) are non-flagellated, non-gliding, oval-shaped rods, 0.5-1.0 mu m wide and 1.0-2.0 mu m long. BH-SD19(T) is strictly aerobic, and oxidase-and catalase-positive. Growth occurs at 15-40 degrees C (optimum 35 degrees C), at pH 6.0-8.5 (optimum 7.0-7.5) and with 1-10% (w/v) NaCl (optimum 2 %). The predominant fatty acids are C-19:0cyclo omega 8c (46.5 %), C-16:0 (20.3 %) and C-18:1 omega 7c and/or C-18:1 omega 6c (10.6 %). The major respiratory quinone is Q-10. The major polar lipids are phosphatidylglycerol, phosphatidylethanolamine and an unidentified phospholipid. The DNA G+C content is 64.0 mol%. BH-SD19T shows the highest 16S rRNA sequence similarity to Pontibaca methylaminivorans (95.2 %) and strains of species of the genus Roseovarius (93.4-95.2 %). Sequence similarity values between BH-SD19(T) and other phylogenetically related species are all below 95.0 %. Phylogenetic trees based on 16S rRNA gene sequences indicate that BH-SD19(T) forms a distinct lineage and does not join any known genera in the trees. Phenotypic, chemotaxonomic and phylogenetic data indicate that BH-SD19(T) represents a novel genus and species in the family Rhodobacteraceae, for which the name Pelagivirga sediminicola gen. nov., sp. nov. is proposed. The type strain is BH-SD19T (=CCTCC AB 2017074(T) = KCTC 62202(T)).
引用
收藏
页码:3494 / 3499
页数:6
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