Systematics of genus Gnomoniopsis (Gnomoniaceae, Diaporthales) based on a three gene phylogeny, host associations and morphology

被引:56
|
作者
Walker, Donald M. [1 ,2 ]
Castlebury, Lisa A. [2 ]
Rossman, Amy Y. [2 ]
Sogonov, Mikhail V. [3 ]
White, James F. [1 ]
机构
[1] Rutgers State Univ, Dept Plant Biol & Pathol, New Brunswick, NJ 08901 USA
[2] USDA ARS, Systemat Mycol & Microbiol Lab, Beltsville, MD 20705 USA
[3] EMSL Analyt Inc, Beltsville, MD 20705 USA
基金
美国国家科学基金会;
关键词
multilocus phylogeny; oak anthracnose; secondary structural alignment; strawberry leaf blotch and petiole blight; systematics; FAGUS-SYLVATICA; INFERENCE; ALIGNMENT; MRBAYES; SPRUCE; SETS;
D O I
10.3852/10-002
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Species of Gnomoniopsis are leaf- and stem-inhabiting pyrenomycetes that infect plants in Fagaceae, Onagraceae and Rosaceae. Morphology and analyses of DNA sequences from three ribosomal DNA and protein coding regions, namely beta-tubulin, translation elongation factor 1 alpha (tef-1 alpha) and the ITS region including ITS1, 5.8S rDNA. and ITS2, were used to define species in Gnomoniopsis. Secondary structural alignment of the ITS region across four genera in Gnomoniaceae was used to increase the potential number of homologous positions in the ITS alignment. Ascospore isolates were grown from newly collected specimens. Type specimens were compared with these specimens to determine their identity. In this paper a recent concept of Gnomoniopsis is confirmed with phylogenetic resolution of additional species. Four new combinations and one new species are proposed. Nine species are described and illustrated, and a key is provided to the 13 species currently recognized in Gnomoniopsis.
引用
收藏
页码:1479 / 1496
页数:18
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