Transport and dispersion across wiggling nanopores

被引:101
作者
Marbach, Sophie [1 ,2 ]
Dean, David S. [3 ]
Bocquet, Lyderic [1 ,2 ]
机构
[1] Ecole Normale Super, Lab Phys Stat, Paris, France
[2] PSL Univ, CNRS, Paris, France
[3] Univ Bordeaux, CNRS, UMR 5798, LOMA, Talence, France
关键词
CARBON NANOTUBES; MOLECULAR-DYNAMICS; ION SELECTIVITY; DIFFUSION; FLOW; FLUCTUATIONS; STABILITY; CHANNEL; SIZE;
D O I
10.1038/s41567-018-0239-0
中图分类号
O4 [物理学];
学科分类号
0702 ;
摘要
The transport of fluids at the nanoscale has achieved major breakthroughs over recent years(1-4); however, artificial channels still cannot match the efficiency of biological porins in terms of fluxes or selectivity. Pore shape agitation-due to thermal fluctuations or in response to external stimuli-is believed to facilitate transport in biochannels(5-9), but its impact on transport in artificial pores remains largely unexplored. Here we introduce a general theory for transport through thermally or actively fluctuating channels, which quantifies the impact of pore fluctuations on confined diffusion in terms of the spectral statistics of the channel fluctuations. Our findings demonstrate a complex interplay between transport and surface wiggling: agitation enhances diffusion via the induced fluid flow, but spatial variations in pore geometry can induce a slowing down via entropic trapping, in full agreement with molecular dynamics simulations and existing observations from the literature. Our results elucidate the impact of pore agitation in a broad range of artificial and biological porins, but also, at larger scales, in vascular motion in fungi, intestinal contractions and microfluidic surface waves. These results open up the possibility that transport across membranes can be actively tuned by external stimuli, with potential applications to nanoscale pumping, osmosis and dynamical ultrafiltration.
引用
收藏
页码:1108 / 1113
页数:6
相关论文
共 46 条
[1]   Random network peristalsis in Physarum polycephalum organizes fluid flows across an individual [J].
Alim, Karen ;
Amselem, Gabriel ;
Peaudecerf, Francois ;
Brenner, Michael P. ;
Pringle, Anne .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2013, 110 (33) :13306-13311
[2]   Molecular dynamics study of the KcsA potassium channel [J].
Allen, TW ;
Kuyucak, S ;
Chung, SH .
BIOPHYSICAL JOURNAL, 1999, 77 (05) :2502-2516
[3]   ON THE DISPERSION OF A SOLUTE IN A FLUID FLOWING THROUGH A TUBE [J].
ARIS, R .
PROCEEDINGS OF THE ROYAL SOCIETY OF LONDON SERIES A-MATHEMATICAL AND PHYSICAL SCIENCES, 1956, 235 (1200) :67-77
[4]  
Berman H. M., 2006, International Tables for Crystallography, P675, DOI [DOI 10.1107/97809553602060000722, 10.1107/97809553602060000722]
[5]   A Dynamic Knockout Reveals That Conformational Fluctuations Influence the Chemical Step of Enzyme Catalysis [J].
Bhabha, Gira ;
Lee, Jeeyeon ;
Ekiert, Damian C. ;
Gam, Jongsik ;
Wilson, Ian A. ;
Dyson, H. Jane ;
Benkovic, Stephen J. ;
Wright, Peter E. .
SCIENCE, 2011, 332 (6026) :234-238
[6]   Nanofluidics, from bulk to interfaces [J].
Bocquet, Lyderic ;
Charlaix, Elisabeth .
CHEMICAL SOCIETY REVIEWS, 2010, 39 (03) :1073-1095
[7]   Molecular dynamics study of the KcsA channel at 2.0-Å resolution:: stability and concerted motions within the pore [J].
Compoint, M ;
Carloni, P ;
Ramseyer, C ;
Girardet, C .
BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES, 2004, 1661 (01) :26-39
[8]   Effect of flow and peristaltic mixing on bacterial growth in a gut-like channel [J].
Cremer, Jonas ;
Segota, Igor ;
Yang, Chih-yu ;
Arnoldini, Markus ;
Sauls, John T. ;
Zhang, Zhongge ;
Gutierrez, Edgar ;
Groisman, Alex ;
Hwa, Terence .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2016, 113 (41) :11414-11419
[9]   On phonons and water flow enhancement in carbon nanotubes [J].
Cruz-Chu, Eduardo R. ;
Papadopoulou, Ermioni ;
Walther, Jens H. ;
Popadic, Aleksandar ;
Li, Gengyun ;
Praprotnik, Matej ;
Koumoutsakos, Petros .
NATURE NANOTECHNOLOGY, 2017, 12 (12) :1106-1107
[10]   Spreading of viscous fluid drops on a solid substrate assisted by thermal fluctuations [J].
Davidovitch, B ;
Moro, E ;
Stone, HA .
PHYSICAL REVIEW LETTERS, 2005, 95 (24)