Ktedonosporobacter rubrisoli gen. nov., sp. nov., a novel representative of the class Ktedonobacteria, isolated from red soil, and proposal of Ktedonosporobacteraceae fam. nov

被引:7
作者
Yan, Bingfa [1 ,2 ]
Guo, Xiaoxuan [1 ,2 ]
Liu, Minghao [1 ]
Huang, Ying [1 ]
机构
[1] Chinese Acad Sci, Inst Microbiol, State Key Lab Microbial Resources, Beijing 100101, Peoples R China
[2] Univ Chinese Acad Sci, Coll Life Sci, Beijing 100049, Peoples R China
基金
中国国家自然科学基金;
关键词
Ktedoncsporobacter; polyphasic taxonomy; complete genome sequence; red soil; Ktedonosporobacteraceae; RIBOSOMAL-RNA GENE; EMENDED DESCRIPTION; SEQUENCE ALIGNMENT; CLASSIFICATION; IDENTIFICATION; PHYLOGENY; BACTERIA;
D O I
10.1099/ijsem.0.003864
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A novel filamentous, spore-forming, Gram-stain-positive bacterium, designated SCAWS-G2(T), was isolated from red soil in Jiangxi Province, PR China. The strain grew at 25-45 degrees C and at pH 4.0-7.0, and was able to tolerate up to 50 mM Zn2+. The complete genome of strain SCAWS-G2(T) was a circular chromosome of similar to 11.34 Mb, which contained four 16S rRNA genes with three sequence types (0.4-0.8%differences). Phylogenetic analysis based on 16S rRNA gene sequences showed that strain SCAWS-G2(T) formed a distinct lineage within the order Ktedonobacterales, showing <89.2% sequence similarities to the recognized taxa of this order. The whole-genome based phylogenomic tree separated strain SCAWS-G2(T) from the recognized families within Ktedonobacterales. The genome-wide average nucleotide identity values between strain SCAWS-G2(T) and the related type strains were <68.2%. The strain can also be differentiated from the recognized families by a number of phenotypic characteristics. The polar lipids of SCAWS-G2(T) were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylinositol, seven unidentified glycolipids and one unidentified lipid. The peptidoglycan amino acids contained ornithine, glycine, glutamic acid and alanine, and the cell-wall sugars were mainly galactose and rhamnose. The major fatty acids were C-16:1 2-OH, C-16(:0) and iso-C-17:0. Based on all these data, we propose that strain SCAWS-G2(T) represents a novel genus and species, Ktedonosporobacter rubrisoli gen. nov., sp. nov., within the new family Ktedonosporobacteraceae fam. nov. of the order Ktedonobacterales. The type strain of Ktedonosporobacter rubrisoli is SCAWS-G2(T) (=CGMCC 1.16132(T) =DSM 105258(T)).
引用
收藏
页码:1015 / 1025
页数:11
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