Complete Coding Genome Sequence of an Influenza A/H3N8 Equine Virus Isolated in Kazakhstan in 2007

被引:0
作者
Burashev, Yerbol [1 ,3 ]
Orynbayev, Mukhit [1 ]
Zakarya, Kunsulu [1 ]
Abduraimov, Yergali [1 ]
Kassenov, Markhabat [1 ]
Strochkov, Vitaliy [2 ]
Kozhabergenov, Nurlan [1 ]
Usserbayev, Bekbolat [1 ]
Melisbek, Aibarys [1 ]
Shirinbekov, Meirzhan [1 ]
Sypatay, Nuradyl [2 ]
Sultankulova, Kulyaisan [1 ]
机构
[1] Res Inst Biol Safety Problems RIBSP, Gvardeyskiy, Kazakhstan
[2] Kazakh Natl Agr Univ, Alma Ata, Kazakhstan
[3] Al Farabi Kazakh Natl Univ, Fac Biol & Biotechnol, Alma Ata, Kazakhstan
来源
MICROBIOLOGY RESOURCE ANNOUNCEMENTS | 2022年 / 11卷 / 10期
关键词
SURVEILLANCE;
D O I
10.1128/mra.01147-21
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Here, we reported the complete coding sequence of the influenza A/equine/Otar/3/2007 (H3N8) equine virus, first isolated in Kazakhstan in 2007. The hemagglutinin (HA) sequences of the Kazakhstan isolates appeared to be closely related to viruses isolated in early 2000 in Asia. Phylogenetic analysis characterized the Kazakhstan isolates as a member of the Florida sublineage Glade 2 by the HA protein sequence.
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页数:3
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共 14 条
  • [1] BASIC LOCAL ALIGNMENT SEARCH TOOL
    ALTSCHUL, SF
    GISH, W
    MILLER, W
    MYERS, EW
    LIPMAN, DJ
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 1990, 215 (03) : 403 - 410
  • [2] Burashev Y, 2018, GENOME ANNOUNCEMENTS, V6, DOI [10.1128/genomeA.00574-18, 10.1128/genomea.00574-18]
  • [3] Equine influenza-A global perspective
    Cullinane, A.
    Newton, J. R.
    [J]. VETERINARY MICROBIOLOGY, 2013, 167 (1-2) : 205 - 214
  • [4] Equine influenza - surveillance and control
    Cullinane, Ann
    Elton, Debra
    Mumford, Jenny
    [J]. INFLUENZA AND OTHER RESPIRATORY VIRUSES, 2010, 4 (06) : 339 - 344
  • [5] FELSENSTEIN J, 1985, EVOLUTION, V39, P783, DOI 10.1111/j.1558-5646.1985.tb00420.x
  • [6] Universal primer set for the full-length amplification of all influenza A viruses
    Hoffmann, E
    Stech, J
    Guan, Y
    Webster, RG
    Perez, DR
    [J]. ARCHIVES OF VIROLOGY, 2001, 146 (12) : 2275 - 2289
  • [7] Retrospective Analysis of the Equine Influenza Virus A/Equine/Kirgizia/26/1974 (H7N7) Isolated in Central Asia
    Karamendin, Kobey
    Kydyrmanov, Aidyn
    Sayatov, Marat
    Strochkov, Vitaliy
    Sandybayev, Nurlan
    Sultankulova, Kulaysan
    [J]. PATHOGENS, 2016, 5 (03)
  • [9] Kumar S, 2016, MOL BIOL EVOL, V33, P1870, DOI [10.1093/molbev/msw054, 10.1093/molbev/msv279]
  • [10] Evolution and Divergence of H3N8 Equine Influenza Viruses Circulating in the United Kingdom from 2013 to 2015
    Rash, Adam
    Morton, Rachel
    Woodward, Alana
    Maes, Olivia
    McCauley, John
    Bryant, Neil
    Elton, Debra
    [J]. PATHOGENS, 2017, 6 (01)