Optimized criteria for locomotion-based healthspan evaluation in C. elegans using the WorMotel system

被引:11
|
作者
Jushaj, Areta [1 ]
Churgin, Matthew [2 ]
Yao, Bowen [2 ]
De La Torre, Miguel [2 ]
Fang-Yen, Christopher [2 ]
Temmerman, Liesbet [1 ]
机构
[1] Katholieke Univ Leuven, Dept Biol, Anim Physiol & Neurobiol, Leuven, Belgium
[2] Univ Penn, Dept Bioengn, Philadelphia, PA 19104 USA
来源
PLOS ONE | 2020年 / 15卷 / 03期
基金
美国国家卫生研究院;
关键词
AGE-RELATED-CHANGES; LIFE-SPAN; CAENORHABDITIS-ELEGANS;
D O I
10.1371/journal.pone.0229583
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Getting a grip on how we may age healthily is a central interest of biogerontological research. To this end, a number of academic teams developed platforms for life- and health-span assessment in Caenorhabditis elegans. These are very appealing for medium- to high throughput screens, but a broader implementation is lacking due to many systems relying on custom scripts for data analysis that others struggle to adopt. Hence, user-friendly recommendations would help to translate raw data into interpretable results. The aim of this communication is to streamline the analysis of data obtained by the WorMotel, an economically and practically appealing screening platform, in order to facilitate the use of this system by interested researchers. We here detail recommendations for the stepwise conversion of raw image data into activity values and explain criteria for assessment of health in C. elegans based on locomotion. Our analysis protocol can easily be adopted by researchers, and all needed scripts and a tutorial are available in S1 and S2 Files.
引用
收藏
页数:20
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