Genetic screening of Russian Usher syndrome patients toward selection for gene therapy

被引:12
作者
Ivanova, Marianna E. [1 ]
Trubilin, Vladimir N. [2 ]
Atarshchikov, Dmitry S. [3 ]
Demchinsky, Andrey M. [4 ]
Strelnikov, Vladimir V. [5 ]
Tanas, Alexander S. [5 ]
Orlova, Olga M. [2 ]
Machalov, Anton S. [6 ,7 ]
Overchenko, Kira, V [6 ,7 ]
Markova, Tatiana, V [5 ]
Golenkova, Daria M. [2 ]
Anoshkin, Kirill, I [5 ]
Volodin, Ilya V. [5 ]
Zaletaev, Dmitry, V [8 ]
Pulin, Andrey A. [9 ]
Nadelyaeva, Irina I. [10 ]
Kalinkin, Alexey, I [5 ,8 ]
Barh, Debmalya [11 ,12 ]
机构
[1] Oftalmic LLC, Moscow, Russia
[2] Fed Med Biol Agcy, Ctr Ophthalmol, State Res Ctr, Moscow, Russia
[3] Cent Clin Hosp President Affairs, Moscow, Russia
[4] Sensor Tech Sci & Ind Lab, Moscow, Russia
[5] Fed State Budgetary Inst, Res Ctr Med Genet, Moscow, Russia
[6] FMBA Russia, Sci & Clin Ctr Otorhinolaryngol, Surdol Dept, Moscow, Russia
[7] FMBA Russia, Sci & Clin Ctr Otorhinolaryngol, Otoneurol Dept, Moscow, Russia
[8] IM Sechenov First Moscow State Med Univ, Inst Mol Med, Lab Med Genet, Moscow, Russia
[9] Fed State Budgetary Sci Inst, Inst Gen Pathol & Pathophysiol, Lab Cell Biol & Dev Pathol, Moscow, Russia
[10] AI Yevdokimov Moscow State Univ Med & Dent, Minist Hlth Care Russia, Fed State Budget Inst Higher Educ, Moscow, Russia
[11] IIOAB, Ctr Genom & Appl Gene Technol, Purba Medinipur, W Bengal, India
[12] NITTE Deemed Univ, Div Bioinformat & Computat Genom, NUCSER, Mangaluru, Karnataka, India
关键词
Usher syndrome; MYO7A; USH2A; gene therapy; Russian cohort; USH2A GENE; MOLECULAR DIAGNOSIS; MUTATION SPECTRUM; IDENTIFICATION; HETEROGENEITY; MYO7A;
D O I
10.1080/13816810.2018.1532527
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Background: Usher syndrome (USH) is heterogeneous in nature and requires genetic test for diagnosis and management. Mutations in USH associated genes are reported in some populations except Russians. Here, we first time represented the mutation spectrum of a Russian USH cohort. Methods: Twenty-eight patients with USH were selected from 3214 patients from Deaf-Blind Support Foundation "Con-nection" during 2014-2016 following the observational study NCT03319524. Complete ophthalmologic, ENT, and vestibular medical tests were done for clinical characterization. NGS, MLPA, and Sanger sequencing were considered for genetic analysis. Results: Around 53.57% and 39.28% patients had USH1 and USH2, respectively; 17.85% cases (n = 5/28) had no known mutation. Eleven (73.33%) subjects showed variations in USH1 associated genes MYO7A (72.72%), CDH23 (9.09%), PCDH15 (9.09%), and USH1C (9.09%). Eleven mutations are detected in MYO7A where 54.54% are novel. MYO7A: p.Q18* was most frequent (27.27%) mutation and is associated with early manifestation and most severe clinical picture. Two novel mutations (p.E1301* and c.158-?_318+?del) are detected in PCDH15 gene. Around 90.90% patients suspected to be USH2 are confirmed by genetic testing. Eleven mutations detected in the USH2A gene, where 27.27% were novel. Most common USH2A mutation is p.W3955* (50%) followed by p.E767fs, p.R1653*, and c.8682-9A> G (20% each). Conclusion: The Russian USH cohort shows both novel and known USH mutations. Clinically the prevalence of USH2 is low (39.28%) and the frequency of MYO7A mutations responsible for USH1B is very high (63.63%, N = 7/11) compared to other cohorts. These seven patients carrying MYO7A mutations are preliminarily eligible for the UshStat (R) gene therapy.
引用
收藏
页码:706 / 713
页数:8
相关论文
共 26 条
  • [1] Diversity of the Genes Implicated in Algerian Patients Affected by Usher Syndrome
    Abdi, Samia
    Bahloul, Amel
    Behlouli, Asma
    Hardelin, Jean-Pierre
    Makrelouf, Mohamed
    Boudjelida, Kamel
    Louha, Malek
    Cheknene, Ahmed
    Belouni, Rachid
    Rous, Yahia
    Merad, Zahida
    Selmane, Djamel
    Hasbelaoui, Mokhtar
    Bonnet, Crystel
    Zenati, Akila
    Petit, Christine
    [J]. PLOS ONE, 2016, 11 (09):
  • [2] Targeted next generation sequencing for molecular diagnosis of Usher syndrome
    Aparisi, Maria J.
    Aller, Elena
    Fuster-Garcia, Carla
    Garcia-Garcia, Gema
    Rodrigo, Regina
    Vazquez-Manrique, Rafael P.
    Blanco-Kelly, Fiona
    Ayuso, Carmen
    Roux, Anne-Francoise
    Jaijo, Teresa
    Millan, Jose M.
    [J]. ORPHANET JOURNAL OF RARE DISEASES, 2014, 9
  • [3] CDH23 mutation and phenotype heterogeneity:: A profile of 107 diverse families with Usher syndrome and nonsyndromic deafness
    Astuto, LM
    Bork, JM
    Weston, MD
    Askew, JW
    Fields, RR
    Orten, DJ
    Ohliger, SJ
    Riazuddin, S
    Morell, RJ
    Khan, S
    Riazuddin, S
    Kremer, H
    van Hauwe, P
    Moller, CG
    Cremers, CWRJ
    Ayuso, C
    Heckenlively, JR
    Rohrschneider, K
    Spandau, U
    Greenberg, J
    Ramesar, R
    Reardon, W
    Bitoun, P
    Millan, J
    Legge, R
    Friedman, TB
    Kimberling, WJ
    [J]. AMERICAN JOURNAL OF HUMAN GENETICS, 2002, 71 (02) : 262 - 275
  • [4] An innovative strategy for the molecular diagnosis of Usher syndrome identifies causal biallelic mutations in 93% of European patients
    Bonnet, Crystel
    Riahi, Zied
    Chantot-Bastaraud, Sandra
    Smagghe, Luce
    Letexier, Melanie
    Marcaillou, Charles
    Lefevre, Gaelle M.
    Hardelin, Jean-Pierre
    El-Amraoui, Aziz
    Singh-Estivalet, Amrit
    Mohand-Said, Saddek
    Kohl, Susanne
    Kurtenbach, Anne
    Sliesoraityte, Ieva
    Zobor, Ditta
    Gherbi, Souad
    Testa, Francesco
    Simonelli, Francesca
    Banfi, Sandro
    Fakin, Ana
    Glavac, Damjan
    Jarc-Vidmar, Martina
    Zupan, Andrej
    Battelino, Saba
    Martorell Sampol, Loreto
    Antonia Claveria, Maria
    Catala Mora, Jaume
    Dad, Shzeena
    Moller, Lisbeth B.
    Rodriguez Jorge, Jesus
    Hawlina, Marko
    Auricchio, Alberto
    Sahel, Jose-Alain
    Marlin, Sandrine
    Zrenner, Eberhart
    Audo, Isabelle
    Petit, Christine
    [J]. EUROPEAN JOURNAL OF HUMAN GENETICS, 2016, 24 (12) : 1730 - 1738
  • [5] Development of a genotyping microarray for Usher syndrome
    Cremers, Frans P. M.
    Kimberling, William J.
    Kulm, Maigi
    de Brouwer, Arjan P.
    van Wijk, Erwin
    Brinke, Heleen te
    Cremers, Cor W. R. J.
    Hoefsloot, Lies H.
    Banfi, Sandr
    Simonelli, Francesca
    Fleischhauer, Johannes C.
    Berger, Wolfgang
    Kelley, Phil M.
    Haralambous, Elene
    Bitner-Glindzicz, Maria
    Webster, Andrew R.
    Saihan, Zubin
    De Baere, Elfride
    Leroy, Bart P.
    Silvestri, Giuliana
    Mckay, Gareth J.
    Koenekoop, Robert K.
    Millan, Jose M.
    Rosenberg, Thomas
    Joensuu, Tarja
    Sankila, Eeva-Marja
    Weil, Dominique
    Weston, Mike D.
    Wissinger, Bernd
    Kremer, Hannie
    [J]. JOURNAL OF MEDICAL GENETICS, 2007, 44 (02) : 153 - 160
  • [6] Usher syndrome in Denmark: mutation spectrum and some clinical observations
    Dad, Shzeena
    Rendtorff, Nanna Dahl
    Tranebjaerg, Lisbeth
    Gronskov, Karen
    Karstensen, Helena Gasdal
    Brox, Vigdis
    Nilssen, Oivind
    Roux, Anne-Francoise
    Rosenberg, Thomas
    Jensen, Hanne
    Moller, Lisbeth Birk
    [J]. MOLECULAR GENETICS & GENOMIC MEDICINE, 2016, 4 (05): : 527 - 539
  • [7] Partial USH2A deletions contribute to Usher syndrome in Denmark
    Dad, Shzeena
    Rendtorff, Nanna D.
    Kann, Erik
    Albrechtsen, Anders
    Mehrjouy, Mana M.
    Bak, Mads
    Tommerup, Niels
    Tranebjaerg, Lisbeth
    Rosenberg, Thomas
    Jensen, Hanne
    Moller, Lisbeth B.
    [J]. EUROPEAN JOURNAL OF HUMAN GENETICS, 2015, 23 (12) : 1646 - 1651
  • [8] Spectrum of USH2A mutations in Scandinavian patients with Usher syndrome type II
    Dreyer, Bo
    Brox, Vigdis
    Tranebjaerg, Lisbeth
    Rosenberg, Thomas
    Sadeghi, Andre M.
    Moller, Claes
    Nilssen, Oivind
    [J]. HUMAN MUTATION, 2008, 29 (03) : 451 - 451
  • [9] USH2A Gene Editing Using the CRISPR System
    Fuster-Garcia, Carla
    Garcia-Garcia, Gema
    Gonzalez-Romero, Elisa
    Jaijo, Teresa
    Sequedo, Maria D.
    Ayuso, Carmen
    Vazquez-Manrique, Rafael P.
    Millan, Jose M.
    Aller, Elena
    [J]. MOLECULAR THERAPY-NUCLEIC ACIDS, 2017, 8 : 529 - 541
  • [10] Panel-based next generation sequencing as a reliable and efficient technique to detect mutations in unselected patients with retinal dystrophies
    Gloeckle, Nicola
    Kohl, Susanne
    Mohr, Julia
    Scheurenbrand, Tim
    Sprecher, Andrea
    Weisschuh, Nicole
    Bernd, Antje
    Rudolph, Guenther
    Schubach, Max
    Poloschek, Charlotte
    Zrenner, Eberhart
    Biskup, Saskia
    Berger, Wolfgang
    Wissinger, Bernd
    Neidhardt, John
    [J]. EUROPEAN JOURNAL OF HUMAN GENETICS, 2014, 22 (01) : 99 - 104