Three applications of path integrals: equilibrium and kinetic isotope effects, and the temperature dependence of the rate constant of the [1,5] sigmatropic hydrogen shift in (Z)-1,3-pentadiene

被引:17
作者
Zimmermann, Tomas [1 ]
Vanicek, Jiri [1 ]
机构
[1] Ecole Polytech Fed Lausanne, Inst Sci & Ingn Chim, Lab Theoret Phys Chem, CH-1015 Lausanne, Switzerland
关键词
Anharmonicity effects; Equilibrium isotope effect; Kinetic isotope effect; Path integral; Quantum instanton; Rotational-vibrational coupling; 1,5] Sigmatropic hydrogen shift; Temperature dependence of the rate constant; Tunneling; THERMAL RATE CONSTANTS; QUANTUM INSTANTON APPROXIMATION; POTENTIAL-ENERGY SURFACES; ENZYMATIC-REACTIONS; ATOM TRANSFER; SIMULATIONS; DYNAMICS; ENZYMES; MODELS;
D O I
10.1007/s00894-010-0711-y
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Recent experiments have confirmed the importance of nuclear quantum effects even in large biomolecules at physiological temperature. Here we describe how the path integral formalism can be used to describe rigorously the nuclear quantum effects on equilibrium and kinetic properties of molecules. Specifically, we explain how path integrals can be employed to evaluate the equilibrium (EIE) and kinetic (KIE) isotope effects, and the temperature dependence of the rate constant. The methodology is applied to the [1,5] sigmatropic hydrogen shift in pentadiene. Both the KIE and the temperature dependence of the rate constant confirm the importance of tunneling and other nuclear quantum effects as well as of the anharmonicity of the potential energy surface. Moreover, previous results on the KIE were improved by using a combination of a high level electronic structure calculation within the harmonic approximation with a path integral anharmonicity correction using a lower level method.
引用
收藏
页码:1779 / 1787
页数:9
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