Pseudopolymorphs of 2,6-diaminopyrimidin-4-one and 2-amino-6-methylpyrimidin-4-one: one or two tautomers present in the same crystal

被引:13
作者
Gerhardt, Valeska [2 ]
Tutughamiarso, Maya [2 ]
Bolte, Michael [1 ]
机构
[1] Goethe Univ Frankfurt, Inst Anorgan & Analyt Chem, D-60438 Frankfurt, Germany
[2] Goethe Univ Frankfurt, Inst Organ Chem & Chem Biol, D-60438 Frankfurt, Germany
关键词
MOLECULAR-STRUCTURE; ISOCYTOSINE; MONOHYDRATE;
D O I
10.1107/S0108270111013072
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
The derivatives of pyrimidin-4-one can adopt either a 1H- or a 3H-tautomeric form, which affects the hydrogen-bonding interactions in cocrystals with compounds containing complementary functional groups. In order to study their tautomeric preferences, we crystallized 2,6-diaminopyrimidin-4-one and 2-amino-6-methylpyrimidin-4-one. During various crystallization attempts, four structures of 2,6-diaminopyrimidin-4-one were obtained, namely solvent-free 2,6-diaminopyrimidin-4-one, C4H6N4O, (I), 2,6-diaminopyrimidin-4-one-dimethylformamide-water (3/4/1), C4H6N4O center dot 1.33C(3)H(7)NO center dot 0.33H(2)O, (Ia), 2,6-diaminopyrimidin-4-one dimethylacetamide monosolvate, C4H6N4O center dot C4H9NO, (Ib), and 2,6-diaminopyrimidin-4-one-N-methylpyrrolidin-2-one (3/2), C4H6N4O center dot 1.5C(5)H(9)NO, (Ic). The 2,6-diaminopyrimidin-4-one molecules exist only as 3H-tautomers. They form ribbons characterized by R 2 (2)(8) hydrogen-bonding interactions, which are further connected to form three-dimensional networks. An intermolecular N-H...N interaction between amine groups is observed only in (I). This might be the reason for the pyramidalization of the amine group. Crystallization experiments on 2-amino-6-methylpyrimidin-4-one yielded two isostructural pseudopolymorphs, namely 2-amino-6-methylpyrimidin-4(3H)-one-2-amino-6-methylpyrimidin-4(1H)-one-dimethylacetamide (1/1/1), C5H7N3O center dot C5H7N3O center dot C4H9NO, (IIa), and 2-amino-6-methylpyrimidin-4(3H)-one-2-amino-6-methylpyrimidin-4(1H)-one-N-methylpyrrolidin-2-one (1/1/1), C5H7N3O center dot C5H7N3O center dot C5H9NO, (IIb). In both structures, a 1:1 mixture of 1H- and 3H-tautomers is present, which are linked by three hydrogen bonds similar to a Watson-Crick C-G base pair.
引用
收藏
页码:O179 / O187
页数:9
相关论文
共 25 条
[11]   Solution and solid state (CPMAS) NMR studies of the tautomerism of six-membered heterocyclic compounds related to 2-pyridones [J].
López, C ;
Claramunt, RM ;
Alkorta, I ;
Elguero, J .
SPECTROSCOPY-AN INTERNATIONAL JOURNAL, 2000, 14 (03) :121-126
[12]   STRUCTURE OF 6-METHYLISOCYTOSINE [J].
LOWE, PR ;
SCHWALBE, CH ;
WILLIAMS, GJB .
ACTA CRYSTALLOGRAPHICA SECTION C-CRYSTAL STRUCTURE COMMUNICATIONS, 1987, 43 :330-333
[13]   A novel synthetic compound that interrupts androgen receptor signaling in human prostate cancer cells [J].
Lu, Shan ;
Wang, Amy ;
Lu, Shan ;
Dong, Zhongyun .
MOLECULAR CANCER THERAPEUTICS, 2007, 6 (07) :2057-2064
[14]   Mercury CSD 2.0 -: new features for the visualization and investigation of crystal structures [J].
Macrae, Clare F. ;
Bruno, Ian J. ;
Chisholm, James A. ;
Edgington, Paul R. ;
McCabe, Patrick ;
Pidcock, Elna ;
Rodriguez-Monge, Lucia ;
Taylor, Robin ;
van de Streek, Jacco ;
Wood, Peter A. .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 2008, 41 :466-470
[15]   Redetermination of isocytosine [J].
Portalone, Gustavo ;
Colapietro, Marcello .
ACTA CRYSTALLOGRAPHICA SECTION E-STRUCTURE REPORTS ONLINE, 2007, 63 :O1869-O1871
[16]   CRYSTAL AND MOLECULAR STRUCTURE OF ISOCYTOSINE [J].
SHARMA, BD ;
MCCONNELL, JF .
ACTA CRYSTALLOGRAPHICA, 1965, 19 :797-+
[17]   A short history of SHELX [J].
Sheldrick, George M. .
ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES, 2008, 64 :112-122
[18]   MOLECULAR-STRUCTURE AND SOME REACTIVITY ASPECTS OF 2,6-DIAMINO-4(3H)-PYRIMIDINONE MONOHYDRATE [J].
SKOWERANDA, J ;
BUKOWSKASTRZYZEWSKA, M ;
BARTNIK, R ;
STRZYZEWSKI, W .
JOURNAL OF CRYSTALLOGRAPHIC AND SPECTROSCOPIC RESEARCH, 1990, 20 (02) :117-121
[19]   Structure validation in chemical crystallography [J].
Spek, Anthony L. .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2009, 65 :148-155
[20]  
Stoe & Cie, 2001, X AREA