The complete chloroplast genome sequence of Borago officinalis Linn. (Boraginaceae) and its phylogenetic analysis

被引:6
|
作者
Guo, Xu [1 ,2 ,3 ]
Wang, Xinkun [1 ,2 ,3 ]
Wang, Qing [1 ,2 ,3 ]
Liu, Chao [1 ,2 ,3 ]
Zhang, Ruirui [1 ,2 ,3 ]
Cheng, Anwei [1 ,2 ,3 ]
Sun, Jinyue [1 ,2 ,3 ]
机构
[1] Minist Agr & Rural Affairs, Key Lab Novel Food Resources Proc, Jinan, Peoples R China
[2] Key Lab Agroproad Proc Technol Shandong, Jinan, Peoples R China
[3] Shandong Acad Agr Sci, Inst Agrofood Sci & Technol, Jinan 250100, Shandong, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2020年 / 5卷 / 02期
基金
中国国家自然科学基金;
关键词
Borago officinalis; complete chloroplast genome; Illumina sequencing; phylogenetic analysis;
D O I
10.1080/23802359.2020.1741467
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Borago officinalis is a kind of vegetable and traditional medicinal herb in the Mediterranean region, and now it has spread many areas around the world. In this study, we sequenced a complete chloroplast (cp) genome sequence of B. officinalis to investigate its phylogenetic relationship with other species. The whole cp genome of B. officinalis is 149,835 bp in length with 37.82% overall GC content, including a large single-copy (LSC) region of 78,840 bp and a small single-copy (SSC) region of 16,967 bp, which are separated by a pair of inverted repeats (IRs) of 27,014 bp. The cp genome contains 110 genes, including 76 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. The phylogenetic analysis based on cp genome sequences showed that B. officinalis is closely related to Antirhea chinensis, Mitragyna speciosa and Neolamarckia cadamba.
引用
收藏
页码:1461 / 1462
页数:2
相关论文
共 50 条
  • [41] Complete chloroplast genome sequence and phylogenetic analysis of Ilex x attenuata 'Fosteri' (Aquifoliaceae)
    Chong, Xinran
    Zhang, Fan
    Li, Yunlong
    Wang, Chuanyong
    Zhou, Yanwei
    Zhou, Ting
    Wang, Yinjie
    Lu, Xiaoqing
    Chen, Hong
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (10): : 2799 - 2800
  • [42] The complete chloroplast genome sequence and phylogenetic analysis of the medicinal plant Rubus chingii Hu
    Wang, Qirui
    Yu, Shuisheng
    Gao, Chenshu
    Ge, Yuqing
    Cheng, Rubin
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (02): : 1307 - 1308
  • [43] Sequencing of the complete chloroplast genome of Rubia yunnanensis Diels and its phylogenetic analysis
    Wang, Wei
    Xu, Tao
    Song, Xiangwen
    Chen, Cunwu
    Liu, Dong
    Han, Bangxing
    Yi, Shanyong
    MITOCHONDRIAL DNA PART B-RESOURCES, 2022, 7 (06): : 1087 - 1089
  • [44] The first complete chloroplast genome of Haymondia wallichii (Fabaceae) and its phylogenetic analysis
    Huang, Xianjun
    Xia, Conglong
    Zhao, Yuan
    Xu, Li
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (07): : 1865 - 1866
  • [45] Characterization of the complete chloroplast genome sequence of Galinsoga parviflora and its phylogenetic implications
    Zhang, Zhiyong
    Chen, Ying
    Jiang, Xuebo
    Zhu, Piao
    Zeng, Yanling
    Tang, Tianming
    Li, Ling
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 2106 - 2108
  • [46] Characterization of the complete chloroplast genome sequence of Conyza canadensis and its phylogenetic implications
    Zhang, Zhiyong
    Jiang, Xuebo
    Chen, Ying
    Zhu, Piao
    Li, Ling
    Zeng, Yanling
    Tang, Tianming
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01): : 2028 - 2030
  • [47] Characterization of the complete chloroplast genome sequence of Tinospora sagittata and its phylogenetic implications
    Peng, Cuiying
    Liang, Junsheng
    Xie, Qiaoying
    Wang, Xujun
    Guo, Wei
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (01): : 176 - 177
  • [48] The Complete Chloroplast Genome Sequence of Machilus chuanchienensis (Lauraceae): Genome Structure and Phylogenetic Analysis
    Bai, Xue
    Peng, Juan
    Yang, Yongyi
    Xiong, Biao
    GENES, 2022, 13 (12)
  • [49] Characterization of the complete chloroplast genome sequence of Pennisetum glaucum and its phylogenetic implications
    Xu, Jin
    Song, Yun
    Jing, Xiaoyan
    Li, Mingfu
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 3764 - 3765
  • [50] The complete chloroplast genome sequence of Lindera fragrans (Lauraceae): genome structure and phylogenetic analysis
    Bai, Xue
    Peng, Juan
    Xiong, Biao
    MITOCHONDRIAL DNA PART B-RESOURCES, 2022, 7 (06): : 1194 - 1195