Crystallization and preliminary X-ray diffraction studies of a DNA excision repair enzyme, UvrB, from Thermus thermophilus HB8

被引:5
|
作者
Shibata, A [1 ]
Nakagawa, N [1 ]
Sugahara, M [1 ]
Masui, R [1 ]
Kato, R [1 ]
Kuramitsu, S [1 ]
Fukuyama, K [1 ]
机构
[1] Osaka Univ, Grad Sch Sci, Dept Biol, Toyonaka, Osaka 5600043, Japan
关键词
D O I
10.1107/S0907444998015777
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
A DNA excision repair enzyme, UvrB, from Thermus thermophilus HB8 was crystallized by the vapor-diffusion method using lithium sulfate as the precipitant and beta-octylglucoside as an additive. The crystals belong to the trigonal space group P3(1)21 or P3(2)21, with unit-cell dimensions of a = b = 136.0 and c = 108.1 Angstrom. The crystal is most likely to contain one UvrB protein in an asymmetric unit with the V-m, value of 3.8 Angstrom(3) Da(-1). The crystals diffracted X-rays beyond 2.9 Angstrom resolution Although the crystals were sensitive to X-ray irradiation at room temperature, the frozen crystals at 100K showed no apparent decay during the intensity measurement.
引用
收藏
页码:704 / 705
页数:2
相关论文
共 50 条
  • [1] Crystallization and preliminary X-ray studies of a thermostable DNA photolyase from Thermus thermophilus HB8
    Komori, H
    Tsujiuchi, H
    Masui, R
    Kuramitsu, S
    Yokoyama, S
    Shibata, T
    Inoue, Y
    Miki, K
    PROTEIN AND PEPTIDE LETTERS, 2001, 8 (06): : 495 - 498
  • [2] Crystallization and preliminary X-ray diffraction studies of nucleoside diphosphate kinase from Thermus thermophilus HB8
    Takeishi, S
    Nakagawa, N
    Maoka, N
    Kihara, M
    Moriguchi, M
    Masui, R
    Kuramitsu, S
    ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 2003, 59 : 1843 - 1845
  • [3] Overproduction, crystallization and preliminary X-ray diffraction analysis of a quinone oxidoreductase from Thermus thermophilus HB8
    Shimomura, Y
    Sumiguchi-Agari, K
    Masui, R
    Kuramitsu, S
    Fukuyama, K
    ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2002, 58 : 1365 - 1367
  • [4] CRYSTALLIZATION AND PRELIMINARY-X-RAY DIFFRACTION STUDIES OF A NADH OXIDASE FROM THERMUS-THERMOPHILUS HB8
    ERDMANN, H
    HECHT, HJ
    PARK, HJ
    SPRINZL, M
    SCHOMBURG, D
    SCHMID, RD
    JOURNAL OF MOLECULAR BIOLOGY, 1993, 230 (03) : 1086 - 1088
  • [5] Overproduction, crystallization and preliminary X-ray diffraction analysis of probable ATP sulfurylase from Thermus thermophilus HB8
    Taguchi, Y
    Hoseki, J
    Kakuta, Y
    Fukuyama, K
    ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 2003, 59 : 1645 - 1647
  • [6] Crystallization and preliminary X-ray crystallographic analysis of peptide deformylase from Thermus thermophilus HB8
    Kamo, M
    Kudo, N
    Lee, WC
    Motoshima, H
    Tanokura, M
    ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2004, 60 : 1299 - 1300
  • [7] Expression, purification, crystallization and preliminary X-ray studies of geranylgeranyl diphosphate synthase from Thermus thermophilus HB8
    Nishio, K
    Nodake, Y
    Hamada, K
    Suto, K
    Nakagawa, N
    Kuramitsu, S
    Miura, K
    ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 2004, 60 : 178 - 180
  • [8] CRYSTALLIZATION AND PRELIMINARY-X-RAY STUDIES OF ISOCITRATE DEHYDROGENASE FROM THERMUS-THERMOPHILUS HB8
    OHZEKI, M
    YAOI, T
    MORIYAMA, H
    OSHIMA, T
    TANAKA, N
    JOURNAL OF BIOCHEMISTRY, 1995, 118 (04): : 679 - 680
  • [9] Crystallization and preliminary X-ray analysis of peptidyl-tRNA hydrolase from Thermus thermophilus HB8
    Matsumoto, Ami
    Shimizu, Yoshihiro
    Takemoto, Chie
    Ueda, Takuya
    Uchiumi, Toshio
    Ito, Kosuke
    ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2013, 69 : 332 - 335
  • [10] Crystallization and preliminary X-ray characterization of aspartate aminotransferase from an extreme thermophile, Thermus thermophilus HB8
    Nakai, T
    Okada, K
    Kawaguchi, S
    Kato, R
    Kuramitsu, S
    Hirotsu, K
    ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 1998, 54 : 1032 - 1034