Rotavirus gastroenteritis is associated mainly with the five genotypes G1,3,4,9P[8] and G2P[4] that are common worldwide, but emerging strains including G6, G8, and G12 are also reported sporadically. G12P[8] rotavirus was observed unexpectedly to spread in a limited area of Italy during the rotavirus surveillance season 2012-2013. All strains were genotyped for VP7 and VP4 and subjected to phylogenetic analysis. Amino acid sequences of antigenic regions were compared with vaccine and field strains. G12P[8] strains were detected in the stools of 52 of 69 (75%) children infected with rotavirus in the central Italian region of Umbria. All G12 strains belonged to lineage III, and presented the P[8] genotype. Sequence analysis showed close nucleotide identity of both VP4 and VP7 genes among Umbria G12P[8] strains. The VP7 gene was also similar to other G12 strains circulating in different years and countries, and the VP4 gene was closely related to other local and global P[8] strains possessing different G-types. Overall findings suggest either the introduction and evolution of a G12 VP7 gene into the local Wa-like rotavirus population or the spreading of a strain novel for the area. Comparison of the VP8* and VP7 antigenic regions showed high conservation between the amino acid sequences of Umbria G12P[8] strains, and revealed various substitutions in the VP8* antigenic regions between the Italian G12P[8] strains and RotaTeq and Rotarix vaccine strains. The sudden and unexpected emergence of G12P[8] rotavirus confirms that these strains have the potential to become a sixth common genotype across the world. J. Med. Virol. 87:1292-1302, 2015. (c) 2015 Wiley Periodicals, Inc.
机构:
Childrens Hosp, Mol Med Lab, Boston, MA 02115 USAChildrens Hosp, Mol Med Lab, Boston, MA 02115 USA
Aoki, Scott T.
;
Trask, Shane D.
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Childrens Hosp, Mol Med Lab, Boston, MA 02115 USAChildrens Hosp, Mol Med Lab, Boston, MA 02115 USA
Trask, Shane D.
;
Coulson, Barbara S.
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Univ Melbourne, Dept Microbiol & Immunol, Melbourne, Vic 3010, AustraliaChildrens Hosp, Mol Med Lab, Boston, MA 02115 USA
Coulson, Barbara S.
;
Greenberg, Harry B.
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Stanford Univ, Sch Med, Dept Med, Stanford, CA 94305 USA
Stanford Univ, Sch Med, Dept Microbiol & Immunol, Stanford, CA 94305 USAChildrens Hosp, Mol Med Lab, Boston, MA 02115 USA
Greenberg, Harry B.
;
Dormitzer, Philip R.
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h-index: 0
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Childrens Hosp, Mol Med Lab, Boston, MA 02115 USAChildrens Hosp, Mol Med Lab, Boston, MA 02115 USA
Dormitzer, Philip R.
;
Harrison, Stephen C.
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h-index: 0
机构:
Childrens Hosp, Mol Med Lab, Boston, MA 02115 USA
Harvard Univ, Sch Med, Howard Hughes Med Inst, Boston, MA 02115 USAChildrens Hosp, Mol Med Lab, Boston, MA 02115 USA
机构:
Childrens Hosp, Mol Med Lab, Boston, MA 02115 USAChildrens Hosp, Mol Med Lab, Boston, MA 02115 USA
Aoki, Scott T.
;
Settembre, Ethan C.
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h-index: 0
机构:
Childrens Hosp, Mol Med Lab, Boston, MA 02115 USAChildrens Hosp, Mol Med Lab, Boston, MA 02115 USA
Settembre, Ethan C.
;
Trask, Shane D.
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h-index: 0
机构:
Childrens Hosp, Mol Med Lab, Boston, MA 02115 USAChildrens Hosp, Mol Med Lab, Boston, MA 02115 USA
Trask, Shane D.
;
Greenberg, Harry B.
论文数: 0引用数: 0
h-index: 0
机构:
Stanford Univ, Sch Med, Dept Microbiol & Immunol, Stanford, CA 94305 USA
Stanford Univ, Sch Med, Dept Med, Stanford, CA 94305 USAChildrens Hosp, Mol Med Lab, Boston, MA 02115 USA
Greenberg, Harry B.
;
Harrison, Stephen C.
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h-index: 0
机构:
Childrens Hosp, Mol Med Lab, Boston, MA 02115 USA
Childrens Hosp, Howard Hughes Med Inst, Boston, MA 02115 USAChildrens Hosp, Mol Med Lab, Boston, MA 02115 USA
Harrison, Stephen C.
;
Dormitzer, Philip R.
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h-index: 0
机构:
Childrens Hosp, Mol Med Lab, Boston, MA 02115 USAChildrens Hosp, Mol Med Lab, Boston, MA 02115 USA
机构:
Hungarian Acad Sci, Vet Med Res Inst, H-1143 Budapest, Hungary
Natl Ctr Epidemiol, Div Virol, Budapest, HungaryHungarian Acad Sci, Vet Med Res Inst, H-1143 Budapest, Hungary
Banyai, Krisztian
;
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Laszlo, Brigitta
;
Duque, Jazmin
论文数: 0引用数: 0
h-index: 0
机构:
Ctr Dis Control & Prevent, Div Viral Dis, Natl Ctr Immunizat & Resp Dis, Atlanta, GA USAHungarian Acad Sci, Vet Med Res Inst, H-1143 Budapest, Hungary
Duque, Jazmin
;
Steele, A. Duncan
论文数: 0引用数: 0
h-index: 0
机构:
PATH, Seattle, WA USAHungarian Acad Sci, Vet Med Res Inst, H-1143 Budapest, Hungary
Steele, A. Duncan
;
Nelson, E. Anthony S.
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h-index: 0
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Chinese Univ Hong Kong, Dept Paediat, Hong Kong, Hong Kong, Peoples R ChinaHungarian Acad Sci, Vet Med Res Inst, H-1143 Budapest, Hungary
Nelson, E. Anthony S.
;
Gentsch, Jon R.
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Ctr Dis Control & Prevent, Div Viral Dis, Natl Ctr Immunizat & Resp Dis, Atlanta, GA USAHungarian Acad Sci, Vet Med Res Inst, H-1143 Budapest, Hungary
Gentsch, Jon R.
;
Parashar, Umesh D.
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h-index: 0
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Ctr Dis Control & Prevent, Div Viral Dis, Natl Ctr Immunizat & Resp Dis, Atlanta, GA USAHungarian Acad Sci, Vet Med Res Inst, H-1143 Budapest, Hungary
机构:
Hosp Univ Donostia, Serv Microbiol, Inst BioDonostia, San Sebastian 20014, SpainHosp Univ Donostia, Serv Microbiol, Inst BioDonostia, San Sebastian 20014, Spain
Cilla, G.
;
Montes, M.
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机构:
Hosp Univ Donostia, Serv Microbiol, Inst BioDonostia, San Sebastian 20014, SpainHosp Univ Donostia, Serv Microbiol, Inst BioDonostia, San Sebastian 20014, Spain
Montes, M.
;
Gomariz, M.
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机构:
Hosp Univ Donostia, Serv Microbiol, Inst BioDonostia, San Sebastian 20014, SpainHosp Univ Donostia, Serv Microbiol, Inst BioDonostia, San Sebastian 20014, Spain
Gomariz, M.
;
Alkorta, M.
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Hosp Zumarraga, Serv Microbiol, Zumarraga, SpainHosp Univ Donostia, Serv Microbiol, Inst BioDonostia, San Sebastian 20014, Spain
Alkorta, M.
;
Iturzaeta, A.
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Hosp Zumarraga, Serv Microbiol, Zumarraga, SpainHosp Univ Donostia, Serv Microbiol, Inst BioDonostia, San Sebastian 20014, Spain
Iturzaeta, A.
;
Perez-Yarza, E. G.
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Hosp Univ Donostia, Serv Pediat, San Sebastian 20014, Spain
Basque Country Univ UPV EHU, Fac Med, San Sebastian, SpainHosp Univ Donostia, Serv Microbiol, Inst BioDonostia, San Sebastian 20014, Spain
Perez-Yarza, E. G.
;
Perez-Trallero, E.
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Hosp Univ Donostia, Serv Microbiol, Inst BioDonostia, San Sebastian 20014, Spain
Basque Country Univ UPV EHU, Fac Med, San Sebastian, SpainHosp Univ Donostia, Serv Microbiol, Inst BioDonostia, San Sebastian 20014, Spain
机构:
Childrens Hosp, Mol Med Lab, Boston, MA 02115 USAChildrens Hosp, Mol Med Lab, Boston, MA 02115 USA
Aoki, Scott T.
;
Trask, Shane D.
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h-index: 0
机构:
Childrens Hosp, Mol Med Lab, Boston, MA 02115 USAChildrens Hosp, Mol Med Lab, Boston, MA 02115 USA
Trask, Shane D.
;
Coulson, Barbara S.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Melbourne, Dept Microbiol & Immunol, Melbourne, Vic 3010, AustraliaChildrens Hosp, Mol Med Lab, Boston, MA 02115 USA
Coulson, Barbara S.
;
Greenberg, Harry B.
论文数: 0引用数: 0
h-index: 0
机构:
Stanford Univ, Sch Med, Dept Med, Stanford, CA 94305 USA
Stanford Univ, Sch Med, Dept Microbiol & Immunol, Stanford, CA 94305 USAChildrens Hosp, Mol Med Lab, Boston, MA 02115 USA
Greenberg, Harry B.
;
Dormitzer, Philip R.
论文数: 0引用数: 0
h-index: 0
机构:
Childrens Hosp, Mol Med Lab, Boston, MA 02115 USAChildrens Hosp, Mol Med Lab, Boston, MA 02115 USA
Dormitzer, Philip R.
;
Harrison, Stephen C.
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h-index: 0
机构:
Childrens Hosp, Mol Med Lab, Boston, MA 02115 USA
Harvard Univ, Sch Med, Howard Hughes Med Inst, Boston, MA 02115 USAChildrens Hosp, Mol Med Lab, Boston, MA 02115 USA
机构:
Childrens Hosp, Mol Med Lab, Boston, MA 02115 USAChildrens Hosp, Mol Med Lab, Boston, MA 02115 USA
Aoki, Scott T.
;
Settembre, Ethan C.
论文数: 0引用数: 0
h-index: 0
机构:
Childrens Hosp, Mol Med Lab, Boston, MA 02115 USAChildrens Hosp, Mol Med Lab, Boston, MA 02115 USA
Settembre, Ethan C.
;
Trask, Shane D.
论文数: 0引用数: 0
h-index: 0
机构:
Childrens Hosp, Mol Med Lab, Boston, MA 02115 USAChildrens Hosp, Mol Med Lab, Boston, MA 02115 USA
Trask, Shane D.
;
Greenberg, Harry B.
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h-index: 0
机构:
Stanford Univ, Sch Med, Dept Microbiol & Immunol, Stanford, CA 94305 USA
Stanford Univ, Sch Med, Dept Med, Stanford, CA 94305 USAChildrens Hosp, Mol Med Lab, Boston, MA 02115 USA
Greenberg, Harry B.
;
Harrison, Stephen C.
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h-index: 0
机构:
Childrens Hosp, Mol Med Lab, Boston, MA 02115 USA
Childrens Hosp, Howard Hughes Med Inst, Boston, MA 02115 USAChildrens Hosp, Mol Med Lab, Boston, MA 02115 USA
Harrison, Stephen C.
;
Dormitzer, Philip R.
论文数: 0引用数: 0
h-index: 0
机构:
Childrens Hosp, Mol Med Lab, Boston, MA 02115 USAChildrens Hosp, Mol Med Lab, Boston, MA 02115 USA
机构:
Hungarian Acad Sci, Vet Med Res Inst, H-1143 Budapest, Hungary
Natl Ctr Epidemiol, Div Virol, Budapest, HungaryHungarian Acad Sci, Vet Med Res Inst, H-1143 Budapest, Hungary
Banyai, Krisztian
;
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h-index:
机构:
Laszlo, Brigitta
;
Duque, Jazmin
论文数: 0引用数: 0
h-index: 0
机构:
Ctr Dis Control & Prevent, Div Viral Dis, Natl Ctr Immunizat & Resp Dis, Atlanta, GA USAHungarian Acad Sci, Vet Med Res Inst, H-1143 Budapest, Hungary
Duque, Jazmin
;
Steele, A. Duncan
论文数: 0引用数: 0
h-index: 0
机构:
PATH, Seattle, WA USAHungarian Acad Sci, Vet Med Res Inst, H-1143 Budapest, Hungary
Steele, A. Duncan
;
Nelson, E. Anthony S.
论文数: 0引用数: 0
h-index: 0
机构:
Chinese Univ Hong Kong, Dept Paediat, Hong Kong, Hong Kong, Peoples R ChinaHungarian Acad Sci, Vet Med Res Inst, H-1143 Budapest, Hungary
Nelson, E. Anthony S.
;
Gentsch, Jon R.
论文数: 0引用数: 0
h-index: 0
机构:
Ctr Dis Control & Prevent, Div Viral Dis, Natl Ctr Immunizat & Resp Dis, Atlanta, GA USAHungarian Acad Sci, Vet Med Res Inst, H-1143 Budapest, Hungary
Gentsch, Jon R.
;
Parashar, Umesh D.
论文数: 0引用数: 0
h-index: 0
机构:
Ctr Dis Control & Prevent, Div Viral Dis, Natl Ctr Immunizat & Resp Dis, Atlanta, GA USAHungarian Acad Sci, Vet Med Res Inst, H-1143 Budapest, Hungary
机构:
Hosp Univ Donostia, Serv Microbiol, Inst BioDonostia, San Sebastian 20014, SpainHosp Univ Donostia, Serv Microbiol, Inst BioDonostia, San Sebastian 20014, Spain
Cilla, G.
;
Montes, M.
论文数: 0引用数: 0
h-index: 0
机构:
Hosp Univ Donostia, Serv Microbiol, Inst BioDonostia, San Sebastian 20014, SpainHosp Univ Donostia, Serv Microbiol, Inst BioDonostia, San Sebastian 20014, Spain
Montes, M.
;
Gomariz, M.
论文数: 0引用数: 0
h-index: 0
机构:
Hosp Univ Donostia, Serv Microbiol, Inst BioDonostia, San Sebastian 20014, SpainHosp Univ Donostia, Serv Microbiol, Inst BioDonostia, San Sebastian 20014, Spain
Gomariz, M.
;
Alkorta, M.
论文数: 0引用数: 0
h-index: 0
机构:
Hosp Zumarraga, Serv Microbiol, Zumarraga, SpainHosp Univ Donostia, Serv Microbiol, Inst BioDonostia, San Sebastian 20014, Spain
Alkorta, M.
;
Iturzaeta, A.
论文数: 0引用数: 0
h-index: 0
机构:
Hosp Zumarraga, Serv Microbiol, Zumarraga, SpainHosp Univ Donostia, Serv Microbiol, Inst BioDonostia, San Sebastian 20014, Spain
Iturzaeta, A.
;
Perez-Yarza, E. G.
论文数: 0引用数: 0
h-index: 0
机构:
Hosp Univ Donostia, Serv Pediat, San Sebastian 20014, Spain
Basque Country Univ UPV EHU, Fac Med, San Sebastian, SpainHosp Univ Donostia, Serv Microbiol, Inst BioDonostia, San Sebastian 20014, Spain
Perez-Yarza, E. G.
;
Perez-Trallero, E.
论文数: 0引用数: 0
h-index: 0
机构:
Hosp Univ Donostia, Serv Microbiol, Inst BioDonostia, San Sebastian 20014, Spain
Basque Country Univ UPV EHU, Fac Med, San Sebastian, SpainHosp Univ Donostia, Serv Microbiol, Inst BioDonostia, San Sebastian 20014, Spain