A STOCHASTIC MODEL OF PROLIFERATION OF CANCER STEM CELLS AND ITS ESTIMATION BY PARTICLE FILTERING

被引:0
作者
Bugallo, Monica F. [1 ]
Botchkina, Galina [2 ]
Djuric, Petar M. [1 ]
机构
[1] SUNY Stony Brook, Dept Elect & Comp Engn, Stony Brook, NY 11794 USA
[2] SUNY Stony Brook, Dept Pathol, Stony Brook, NY 11794 USA
来源
2010 IEEE INTERNATIONAL CONFERENCE ON ACOUSTICS, SPEECH, AND SIGNAL PROCESSING | 2010年
基金
美国国家科学基金会;
关键词
Particle filtering; cancer stem cells; high dimensional systems; sparse time series; MATHEMATICAL-MODEL; POPULATION; SPHEROIDS;
D O I
10.1109/ICASSP.2010.5495634
中图分类号
O42 [声学];
学科分类号
070206 ; 082403 ;
摘要
In this paper, we propose a model for proliferation of cancer stem cells and a procedure for estimating the unknowns of the model. Understanding the proliferation of cancer stem cells is critical for the development of anti-cancer therapies. We propose to use a non-linear and non-Gaussian state-space model for studying the proliferation process. For estimation of the unknowns we apply particle filtering, which is particularly appropriate given the nature of the model. In addition, we deal with a very large dimension of the state-space and very sparse time series of measurements. Computer simulations show promising results in a simple scenario generated with synthetic data.
引用
收藏
页码:529 / 533
页数:5
相关论文
共 15 条
[1]   Therapeutic implications of cancer stem cells [J].
Al-Hajj, M ;
Becker, MW ;
Wichal, M ;
Weissman, I ;
Clarke, MF .
CURRENT OPINION IN GENETICS & DEVELOPMENT, 2004, 14 (01) :43-47
[2]  
[Anonymous], 2001, Sequential Monte Carlo methods in practice
[3]   Population Monte Carlo [J].
Cappé, O ;
Guillin, A ;
Marin, JM ;
Robert, CP .
JOURNAL OF COMPUTATIONAL AND GRAPHICAL STATISTICS, 2004, 13 (04) :907-929
[4]   Cancer stem cells: Models and concepts [J].
Dalerba, Piero ;
Cho, Robert W. ;
Clarke, Michael F. .
ANNUAL REVIEW OF MEDICINE, 2007, 58 :267-284
[5]   Particle filtering [J].
Djuric, PM ;
Kotecha, JH ;
Zhang, JQ ;
Huang, YF ;
Ghirmai, T ;
Bugallo, MF ;
Míguez, J .
IEEE SIGNAL PROCESSING MAGAZINE, 2003, 20 (05) :19-38
[6]  
Durand RE, 2001, METHOD CELL BIOL, V64, P211
[7]   A computational model of chemotaxis-based cell aggregation [J].
Eyiyurekli, Manolya ;
Manley, Prakash ;
Lelkes, Peter I. ;
Breen, David E. .
BIOSYSTEMS, 2008, 93 (03) :226-239
[8]   Mathematical model for the cancer stem cell hypothesis [J].
Ganguly, R ;
Puri, IK .
CELL PROLIFERATION, 2006, 39 (01) :3-14
[9]   Cellular signaling in normal and cancerous stem cells [J].
Grinstein, Edgar ;
Wernet, Peter .
CELLULAR SIGNALLING, 2007, 19 (12) :2428-2433
[10]   Characterization of a side population of cancer cells from human gastrointestinal system [J].
Haraguchi, Naotsugu ;
Utsunomiya, Tohru ;
Inoue, Hiroshi ;
Tanaka, Fumiaki ;
Mimori, Koshi ;
Barnard, Graham F. ;
Mori, Masaki .
STEM CELLS, 2006, 24 (03) :506-513