MRBAYES: Bayesian inference of phylogenetic trees

被引:24616
作者
Huelsenbeck, JP [1 ]
Ronquist, F
机构
[1] Univ Rochester, Dept Biol, Rochester, NY 14627 USA
[2] Uppsala Univ, Evolutionary Biol Ctr, Dept Systemat Zool, SE-75236 Uppsala, Sweden
基金
美国国家科学基金会;
关键词
D O I
10.1093/bioinformatics/17.8.754
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The program MRBAYES performs Bayesian inference of phylogeny using a variant of Markov chain Monte Carlo.
引用
收藏
页码:754 / 755
页数:2
相关论文
共 16 条
[1]  
GEYER CJ, 1991, COMPUTING SCIENCE AND STATISTICS, P156
[2]  
Green PJ, 1995, BIOMETRIKA, V82, P711, DOI 10.2307/2337340
[3]   MONTE-CARLO SAMPLING METHODS USING MARKOV CHAINS AND THEIR APPLICATIONS [J].
HASTINGS, WK .
BIOMETRIKA, 1970, 57 (01) :97-&
[4]   Markov chain Monte Carlo algorithms for the Bayesian analysis of phylogenetic trees [J].
Larget, B ;
Simon, DL .
MOLECULAR BIOLOGY AND EVOLUTION, 1999, 16 (06) :750-759
[5]  
Li S, 1996, Ph.D. dissertation
[6]   Nexus: An extensible file format for systematic information [J].
Maddison, DR ;
Swofford, DL ;
Maddison, WP .
SYSTEMATIC BIOLOGY, 1997, 46 (04) :590-621
[7]   Phylogenetic inference for binary data on dendograms using Markov chain Monte Carlo [J].
Mau, B ;
Newton, MA .
JOURNAL OF COMPUTATIONAL AND GRAPHICAL STATISTICS, 1997, 6 (01) :122-131
[8]   Bayesian phylogenetic inference via Markov chain Monte Carlo methods [J].
Mau, B ;
Newton, MA ;
Larget, B .
BIOMETRICS, 1999, 55 (01) :1-12
[9]  
MAU B, 1996, THESIS U WISCONSIN M
[10]   EQUATION OF STATE CALCULATIONS BY FAST COMPUTING MACHINES [J].
METROPOLIS, N ;
ROSENBLUTH, AW ;
ROSENBLUTH, MN ;
TELLER, AH ;
TELLER, E .
JOURNAL OF CHEMICAL PHYSICS, 1953, 21 (06) :1087-1092