Genetic diversity and population structure of six species of Capparis in Tunisia using AFLP markers

被引：13
作者：
Aichi-Yousfi, Haifa [1 ,2 ]
Bahri, Bochra Amina [1 ]
Medini, Maher [3 ]
Rouz, Slim [4 ]
Rejeb, Mohamed Nejib [5 ]
Ghrabi-Gammar, Zeineb [1 ,2 ]
机构：
[1] Univ Carthage, Tunisian Natl Inst Agron, 43 Ave Charles Nicolle, Tunis 1082, Tunisia
[2] Fac Arts & Humanities Mannouba, Unit Res Bicade Biogeog Bioclimatol Appl & Eros D, Mannouba, Tunisia
[3] Tunisian Natl Genes Bank, Biotechnol Lab, Blvd Leader Yasser Arafat, Tunis 1080, Tunisia
[4] Univ Carthage, Agr High Sch Mograne, Dept Agr Prod, Mograne 1121, Zaghouan, Tunisia
[5] Natl Inst Res Rural Engn Water & Forests, Lab Forest Ecol, BP 10, Ariana 2080, Tunisia
来源：
COMPTES RENDUS BIOLOGIES | 2016年 / 339卷 / 11-12期
关键词：
Capparis; AFLP; Genetic distance; Phylogeny; Population structure; SPINOSA L; LENGTH POLYMORPHISMS; MOLECULAR MARKERS; ANTIOXIDANT; VARIABILITY; INFERENCE; SOFTWARE; EXTRACTS; LEAVES;
D O I：
10.1016/j.crvi.2016.09.001
中图分类号：
Q [生物科学];
学科分类号：
07 ; 0710 ; 09 ;
摘要：
In order to study the genetic diversity, the phylogeographic pattern and hybridization between six Tunisian Capparis species, 213 accessions of Caper were genotyped with three primer combinations of amplified fragment length polymorphism (AFLP) markers. Out of 750 fragments generated, 636 were polymorphic and 407 of them were restricted to a single species. STRUCTURE and PCoA analyses clearly separated morphologically different populations into six distinct genetic ones. The UPGMA analysis grouped the species into three main clusters: G1 grouped C. spinosa subsp. spinosa var. spinosa and C. sicula subsp. sicula; G2 grouped C. ovata subsp. ovata and C. orientalis and G3 clustered C. zoharyi and C. aegyptia. Populations from G1, G2 and G3 were mainly distributed in arid, subhumid, and semi-arid bioclimates, respectively. Additional genetic studies on Capparis could help to identify genes underlying speciation events and local adaptation to geographic areas leading to the development of breeding programs. (C) 2016 Academie des sciences. Published by Elsevier Masson SAS. All rights reserved.
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收藏
页码：442 / 453
页数：12
相关论文
共 74 条
[1]   Antiquorum Sensing and Antibiofilm Potential of Capparis spinosa [J].
Abraham, Sybiya Vasantha Packiavathy Issac ;
Palani, Agilandeswari ;
Ramaswamy, Babu Rajendran ;
Shunmugiah, Karutha Pandian ;
Arumugam, Veera Ravi .
ARCHIVES OF MEDICAL RESEARCH, 2011, 42 (08) :658-668
[2]  
Aissani N., 2014, International Journal of Current Microbiology and Applied Sciences, V3, P54
[3]   Genetic Diversity of Some Capparis L. Species Growing in Syria [J].
Al-Safadi, Bassam ;
Faouri, Hussam ;
Elias, Rana .
BRAZILIAN ARCHIVES OF BIOLOGY AND TECHNOLOGY, 2014, 57 (06) :916-926
[4]   Antifungal activity of plant extracts against dermatophytes [J].
Ali-Shtayeh, MS ;
Abu Ghdeib, SI .
MYCOSES, 1999, 42 (11-12) :665-672
[5]  
[Anonymous], 1965, FLORE AFRIQUE NORD
[6]  
Badr A., 2011, J GENET ENG BIOTECHN, V10, P1
[7]  
Battandier J.-A., 1902, FLORE ANALYTIQUE SYN
[8]  
Benseghir-Boukhari L.A., 2007, MEDITERRANEE, V109, P100
[9]  
Bhoyar MS, 2011, AUST J CROP SCI, V5, P912
[10]  
Boulos L., 1999, NORD J BOT, V19, P328
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