Microsatellite markers for Vaccinium from EST and genomic libraries

被引：60
|
作者：
Boches, PS
Bassil, NV
Rowland, LJ
机构：
[1] US EPA, NCGR, Corvallis, OR 97333 USA
[2] USDA ARS, Fruit Lab, Beltsville, MD 20705 USA
来源：
MOLECULAR ECOLOGY NOTES | 2005年 / 5卷 / 03期
关键词：
blueberry; EST; microsatellite; PCR; SSR; Vaccinium;
D O I：
10.1111/j.1471-8286.2005.01025.x
中图分类号：
Q5 [生物化学]; Q7 [分子生物学];
学科分类号：
071010 ; 081704 ;
摘要：
We present 30 microsatellite loci isolated from expressed sequence tag (EST) and genomic libraries in Vaccinium corymbosum L. Allele number per locus in 11 tetraploid and one diploid V. corymbosum accessions ranged from two to 15 (mean = 8.16) in 24 single-locus simple sequence repeats (SSRs). Cross-species amplification in a panel of 12 species representing nine sections ranged from 30 to 100% (mean = 83%).
引用
收藏
页码：657 / 660
页数：4
相关论文
共 50 条
  • [1] EST and random genomic nuclear microsatellite markers for Streptocarpus
    Hughes, M
    Möller, M
    Bellstedt, DU
    Edwards, TJ
    Woodhead, M
    MOLECULAR ECOLOGY NOTES, 2004, 4 (01): : 36 - 38
  • [2] Genetic diversity of Eucalyptus hybrids estimated by genomic and EST microsatellite markers
    Cupertino, F. B.
    Leal, J. B.
    Correa, R. X.
    Gaiotto, F. A.
    BIOLOGIA PLANTARUM, 2011, 55 (02) : 379 - 382
  • [3] Mapping of nine bovine microsatellite markers obtained from large insert genomic libraries
    Rexroad, CE
    Bennett, GL
    Kappes, SM
    Smith, TPL
    JOURNAL OF ANIMAL SCIENCE, 2000, 78 (08) : 2231 - 2232
  • [4] Characterization and comparison of microsatellite markers derived from genomic and expressed libraries for the desert locust
    Blondin, L.
    Badisco, L.
    Pages, C.
    Foucart, A.
    Risterucci, A-M.
    Bazelet, C. S.
    Vanden Broeck, J.
    Song, H.
    Ely, S. Ould
    Chapuis, M-P.
    JOURNAL OF APPLIED ENTOMOLOGY, 2013, 137 (09) : 673 - 683
  • [5] EST versus genomic derived microsatellite markers for genotyping wild and cultivated barley
    Chabane, K
    Ablett, GA
    Cordeiro, GM
    Valkoun, J
    Henry, RJ
    GENETIC RESOURCES AND CROP EVOLUTION, 2005, 52 (07) : 903 - 909
  • [6] EST versus Genomic Derived Microsatellite Markers for Genotyping Wild and Cultivated Barley
    K. Chabane
    G. A. Ablett
    G. M. Cordeiro
    J. Valkoun
    R. J. Henry
    Genetic Resources and Crop Evolution, 2005, 52 : 903 - 909
  • [7] Microsatellite Markers: Valuable in Vaccinium L
    Bassil, Nahla V.
    INTERNATIONAL JOURNAL OF FRUIT SCIENCE, 2012, 12 (1-3) : 288 - 293
  • [8] Structural pattern and genetic diversity in blueberry (Vaccinium) clones and cultivars using EST-PCR and microsatellite markers
    Tailor, Sapan
    Bykova, Natalia V.
    Igamberdiev, Abir U.
    Debnath, Samir C.
    GENETIC RESOURCES AND CROP EVOLUTION, 2017, 64 (08) : 2071 - 2082
  • [9] Structural pattern and genetic diversity in blueberry (Vaccinium) clones and cultivars using EST-PCR and microsatellite markers
    Sapan Tailor
    Natalia V. Bykova
    Abir U. Igamberdiev
    Samir C. Debnath
    Genetic Resources and Crop Evolution, 2017, 64 : 2071 - 2082
  • [10] Tri-/hexanucleotide microsatellite markers in peach derived from enriched genomic libraries and their application in rosaceae
    Nishitani, Chikako
    Kimura, Tetsuya
    Ueda, Eriko
    Howad, Werner
    Arus, Pere
    Yamamoto, Toshiya
    BREEDING SCIENCE, 2007, 57 (04) : 289 - 296
12345