The complete chloroplast genome sequence of Chikusichloa aquatica (Poaceae: Oryzeae)

被引：3

作者：

Zhang, Jie ^{[1
,2
]}

Zhang, Dan ^{[3
]}

Shi, Chao ^{[1
]}

Gao, Ju ^{[1
]}

Gao, Li-Zhi ^{[1
]}

机构：

[1] Chinese Acad Sci, Germplasm Bank Wild Species Southwest China, Plant Germplasm & Genom Ctr, Kunming Inst Bot, Kunming 650201, Peoples R China

[2] Univ Chinese Acad Sci, Beijing, Peoples R China

[3] Kunming Univ Sci & Technol, Fac Life Sci & Technol, Kunming, Peoples R China

来源：

MITOCHONDRIAL DNA PART A | 2016年 / 27卷 / 04期

关键词：

Chikusichloa aquatica Koidz; chloroplast genome; Oryzeae; WILD-RICE; PHYLOGENY; RESOLVES; GENES;

D O I：

10.3109/19401736.2015.1053058

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

The complete chloroplast sequence of the Chikusichloa aquatica was determined in this study. The genome consists of 136 563 bp containing a pair of inverted repeats (IRs) of 20 837 bp, which was separated by a large single-copy region and a small single-copy region of 82 315 bp and 33 411 bp, respectively. The C. aquatica cp genome encodes 111 functional genes (71 protein-coding genes, four rRNA genes, and 36 tRNA genes): 92 are unique, while 19 are duplicated in the IR regions. The genic regions account for 58.9% of whole cp genome, and the GC content of the plastome is 39.0%. A phylogenomic analysis showed that C. aquatica is closely related to Rhynchoryza subulata that belongs to the tribe Oryzeae.

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收藏

页码：2771 / 2772

页数：2

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