Early detection of ankylosing spondylitis using texture features and statistical machine learning, and deep learning, with some patient ageanalysis Riel

被引:26
作者
Castro-Zunti, Riel [1 ]
Park, Eun Hae [2 ]
Choi, Younhee [1 ]
Jin, Gong Yong [2 ]
Ko, Seok-bum [1 ]
机构
[1] Univ Saskatchewan, Dept Elect & Comp Engn, Saskatoon, SK S7N 5C9, Canada
[2] Chonbuk Natl Univ Hosp, Dept Radiol, 20 Geonji Ro,Geumam 2i Dong, Jeonju 54907, Jeollabuk Do, South Korea
基金
新加坡国家研究基金会; 加拿大自然科学与工程研究理事会;
关键词
Radiology; Deep learning; Convolutional neural networks; Statistical machine learning; Texture features; SOCIETY CLASSIFICATION CRITERIA; SPONDYLOARTHRITIS; SACROILIITIS; DIAGNOSIS; CT;
D O I
10.1016/j.compmedimag.2020.101718
中图分类号
R318 [生物医学工程];
学科分类号
0831 ;
摘要
Ankylosin spondylitis (AS) is an arthritis with symptoms visible in medical imagery. This paper proposes, to the authors' best knowledge, the first use of statistical machine learning- and deep learning-based classifiers to detect erosion, an early AS symptom, via analysis of computed tomography (CT) imagery, giving some consideration to patient age in so doing. We used gray-level co-occurrence matrices and local binary patterns to generate input features to machine learning algorithms, specifically k-nearest neighbors (k-NN) and random forest. Deep learning solutions based on a modified InceptionV3 architecture were designed and tested, with one classifier produced by training with a cross-entropy loss function and another produced by additionally seeking to minimize validation loss. We found that the random forest classifiers outperform the k-NN classifiers and achieve an eightfold cross-validation average accuracy, recall, and area under receiver operator characteristic curve (ROC AUC) of 96.0%, 92.9%, and 0.97, respectively, for erosion vs. young control patients, and 82.4%, 80.6%, and 0.91, respectively, for erosion vs. old control patients. We found that the deep learning classifier trained without minimizing validation loss was best and achieves an eightfold cross-validation accuracy, recall, and ROC AUC of 99.0%, 97.5%, and 0.97, respectively, for erosion vs. all (combined young and old) control patients; this classifier outperforms a musculoskeletal radiologist with 9 years of experience in raw sensitivity and specificity by8.4% and 9.5%, respectively. Despite the relatively small dataset on which we trained and cross-validated, our results indicate the potential of machine and deep learning to aid AS diagnosis, and further research using larger datasets should be conducted. (C) 2020 Published by Elsevier Ltd.
引用
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页数:14
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