Identification of Saliva Using MicroRNA Biomarkers for Forensic Purpose

被引:38
作者
Wang, Zheng [1 ]
Zhang, Ji [1 ]
Wei, Wei [1 ]
Zhou, Di [1 ]
Luo, Haibo [1 ]
Chen, Xiaogang [1 ,2 ]
Hou, Yiping [1 ]
机构
[1] West China Univ Med Sci, Dept Forens Genet, West China Sch Preclin & Forens Med, Sichuan Univ, Chengdu 610041, Sichuan, Peoples R China
[2] West China Univ Med Sci, Dept Forens Pathol, West China Sch Preclin & Forens Med, Sichuan Univ, Chengdu 610041, Sichuan, Peoples R China
关键词
forensic science; forensic genetics; body fluid identification; saliva; microRNA; TaqMan; QUANTITATIVE PCR; RNA; EXPRESSION; MARKERS; BLOOD; DNA;
D O I
10.1111/1556-4029.12730
中图分类号
DF [法律]; D9 [法律]; R [医药、卫生];
学科分类号
0301 ; 10 ;
摘要
In the forensic science community, microRNA (miRNA) profiling has started to be explored as an alternative tool for body fluid identification. Several origins of body fluid can be distinguished by measuring differential expression patterns of particular miRNAs. However, most of reported saliva miRNAs are nonoverlapping and debatable. The aim of this study was to develop a strategy of identifying saliva using miRNA biomarkers for forensic purpose. Eight miRNA candidates were selected to examine expression abundance in forensically relevant body fluids using hydrolysis probes quantitative real-time PCR (TaqMan qPCR). Results revealed that none of them was truly saliva specific, and only miR-200c-3p, miR-203a, and miR-205-5p were higher or more moderate expression in saliva. A stepwise strategy that combines each of three miRNAs with different body fluid-specific miRNAs was developed, and three miRNA combinations could effectively differentiate saliva from other body fluids.
引用
收藏
页码:702 / 706
页数:5
相关论文
共 17 条
[1]   Review: The physiology of saliva and transfer of drugs into saliva [J].
Aps, JKM ;
Martens, LC .
FORENSIC SCIENCE INTERNATIONAL, 2005, 150 (2-3) :119-131
[2]   The MIQE Guidelines: Minimum Information for Publication of Quantitative Real-Time PCR Experiments [J].
Bustin, Stephen A. ;
Benes, Vladimir ;
Garson, Jeremy A. ;
Hellemans, Jan ;
Huggett, Jim ;
Kubista, Mikael ;
Mueller, Reinhold ;
Nolan, Tania ;
Pfaffl, Michael W. ;
Shipley, Gregory L. ;
Vandesompele, Jo ;
Wittwer, Carl T. .
CLINICAL CHEMISTRY, 2009, 55 (04) :611-622
[3]   Real-time quantification of microRNAs by stem-loop RT-PCR [J].
Chen, CF ;
Ridzon, DA ;
Broomer, AJ ;
Zhou, ZH ;
Lee, DH ;
Nguyen, JT ;
Barbisin, M ;
Xu, NL ;
Mahuvakar, VR ;
Andersen, MR ;
Lao, KQ ;
Livak, KJ ;
Guegler, KJ .
NUCLEIC ACIDS RESEARCH, 2005, 33 (20) :e179.1-e179.9
[4]   Reproducibility of quantitative RT-PCR array in miRNA expression profiling and comparison with microarray analysis [J].
Chen, Yongxin ;
Gelfond, Jonathan A. L. ;
McManus, Linda M. ;
Shireman, Paula K. .
BMC GENOMICS, 2009, 10 :407
[5]   Specific Micro-RNA Signatures for the Detection of Saliva and Blood in Forensic Body-fluid Identification [J].
Courts, Cornelius ;
Madea, Burkhard .
JOURNAL OF FORENSIC SCIENCES, 2011, 56 (06) :1464-1470
[6]   Use of Bordetella pertussis BP3385 To Establish a Cutoff Value for an IS481-Targeted Real-Time PCR Assay [J].
Guthrie, J. L. ;
Seah, C. ;
Brown, S. ;
Tang, P. ;
Jamieson, F. ;
Drews, S. J. .
JOURNAL OF CLINICAL MICROBIOLOGY, 2008, 46 (11) :3798-3799
[7]   Identification of forensically relevant body fluids using a panel of differentially expressed microRNAs [J].
Hanson, Erin K. ;
Lubenow, Helge ;
Ballantyne, Jack .
ANALYTICAL BIOCHEMISTRY, 2009, 387 (02) :303-314
[8]   Analysis of relative gene expression data using real-time quantitative PCR and the 2-ΔΔCT method [J].
Livak, KJ ;
Schmittgen, TD .
METHODS, 2001, 25 (04) :402-408
[9]   miRNA analysis in vitreous humor to determine the time of death: a proof-of-concept pilot study [J].
Odriozola, Adrian ;
Riancho, Jose A. ;
de la Vega, Rosa ;
Agudo, Gloria ;
Garcia-Blanco, Ana ;
de Cos, Elena ;
Fernandez, Fidel ;
Sanudo, Carolina ;
Zarrabeitia, Maria T. .
INTERNATIONAL JOURNAL OF LEGAL MEDICINE, 2013, 127 (03) :573-578
[10]   Quantitative PCR analysis of blood- and saliva-specific microRNA markers following solid-phase DNA extraction [J].
Omelia, Emma J. ;
Uchimoto, Mari L. ;
Williams, Graham .
ANALYTICAL BIOCHEMISTRY, 2013, 435 (02) :120-122