Evolution of salivary glue genes in Drosophila species

被引:17
作者
Da Lage, Jean-Luc [1 ]
Thomas, Gregg W. C. [2 ,3 ]
Bonneau, Magalie [1 ]
Courtier-Orgogozo, Virginie [4 ]
机构
[1] Univ Paris Saclay, Univ Paris Sud, CNRS, IRD,Evolut,Genomes,Comportement,Ecol,UMR 9191, F-91198 Gif Sur Yvette, France
[2] Indiana Univ, Dept Biol, Bloomington, IN 47405 USA
[3] Indiana Univ, Dept Comp Sci, Bloomington, IN 47405 USA
[4] Univ Paris Diderot, CNRS, Inst Jacques Monod, UMR7592, 15 Rue Helene Brion, F-75013 Paris, France
基金
欧洲研究理事会;
关键词
Drosophila; Glue; Internal repeats; Sgs; Pupa; Adaptation; Disordered protein; Eig71Ee; Mucin; Gene family; Gene copy number; Salivary gland; GLAND SECRETION PROTEINS; PUPATION SITE PREFERENCE; MOLECULAR CHARACTERIZATION; PHYLOGENETIC ANALYSIS; LARVAL; MELANOGASTER; GENOME; SEQUENCES; PUFF; RESOURCE;
D O I
10.1186/s12862-019-1364-9
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
BackgroundAt the very end of the larval stage Drosophila expectorate a glue secreted by their salivary glands to attach themselves to a substrate while pupariating. The glue is a mixture of apparently unrelated proteins, some of which are highly glycosylated and possess internal repeats. Because species adhere to distinct substrates (i.e. leaves, wood, rotten fruits), glue genes are expected to evolve rapidly.ResultsWe used available genome sequences and PCR-sequencing of regions of interest to investigate the glue genes in 20 Drosophila species. We discovered a new gene in addition to the seven glue genes annotated in D. melanogaster. We also identified a phase 1 intron at a conserved position present in five of the eight glue genes of D. melanogaster, suggesting a common origin for those glue genes. A slightly significant rate of gene turnover was inferred. Both the number of repeats and the repeat sequence were found to diverge rapidly, even between closely related species. We also detected high repeat number variation at the intrapopulation level in D. melanogaster.ConclusionMost conspicuous signs of accelerated evolution are found in the repeat regions of several glue genes.
引用
收藏
页数:22
相关论文
共 84 条
[61]   A Random Effects Branch-Site Model for Detecting Episodic Diversifying Selection [J].
Pond, Sergei L. Kosakovsky ;
Murrell, Ben ;
Fourment, Mathieu ;
Frost, Simon D. W. ;
Delport, Wayne ;
Scheffler, Konrad .
MOLECULAR BIOLOGY AND EVOLUTION, 2011, 28 (11) :3033-3043
[62]   HyPhy: hypothesis testing using phylogenies [J].
Pond, SLK ;
Frost, SDW ;
Muse, SV .
BIOINFORMATICS, 2005, 21 (05) :676-679
[63]  
Restifo LL, 1986, J MOL BIOL, V1986, P188
[64]  
Roth GE, 1999, GENETICS, V153, P753
[65]  
Rozas J, 2009, METHODS MOL BIOL, V537, P337, DOI 10.1007/978-1-59745-251-9_17
[66]   SELECTION OF PUPATION SITE BY DROSOPHILA MELANOGASTER AND D SIMULANS [J].
SAMEOTO, DD ;
MILLER, RS .
ECOLOGY, 1968, 49 (01) :177-&
[67]   Molecular evolution of the major chemosensory gene families in insects [J].
Sanchez-Gracia, A. ;
Vieira, F. G. ;
Rozas, J. .
HEREDITY, 2009, 103 (03) :208-216
[68]   Evolution of Protein Domain Repeats in Metazoa [J].
Schueler, Andreas ;
Bornberg-Bauer, Erich .
MOLECULAR BIOLOGY AND EVOLUTION, 2016, 33 (12) :3170-3182
[69]   Larval pupation site preference and its relationship to the glue proteins in a few species of Drosophila [J].
Shivanna, N ;
Murthy, GSS ;
Ramesh, SR .
GENOME, 1996, 39 (01) :105-111
[70]   CLOSELY LINKED DNA ELEMENTS CONTROL THE EXPRESSION OF THE SGS-5 GLUE PROTEIN GENE IN DROSOPHILA [J].
SHORE, EM ;
GUILD, GM .
GENES & DEVELOPMENT, 1987, 1 (08) :829-839