A stochastic model of the single photon response in Drosophila photoreceptors

被引:14
作者
Nikolic, Konstantin [1 ]
Loizu, Joaquim [1 ]
Degenaar, Patrick [1 ]
Toumazou, Chris [1 ]
机构
[1] Univ London Imperial Coll Sci Technol & Med, Inst Biomed Engn, London SW7 2AZ, England
基金
英国工程与自然科学研究理事会;
关键词
LIGHT-SENSITIVE CHANNELS; G-PROTEIN; PHOSPHOLIPASE-C; CALCIUM INFLUX; TRP CHANNELS; PHOTOTRANSDUCTION; ACTIVATION; DIACYLGLYCEROL; ADAPTATION; CALMODULIN;
D O I
10.1039/c0ib00031k
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
We present a quantitative model for the phototransduction cascade in Drosophila photoreceptors. The process consists of four stages: (1) light absorption by Rhodopsin, (2) signal amplification phase mediated by a G-protein coupled cascade, (3) closed/open state kinetics of the transient receptor potential (TRP) ion channels which regulate the ionic current in/out of the cell and (4) Ca regulated positive and negative feedbacks. The model successfully reproduces the experimental results for: single photon absorption "quantum bump" (QB), statistical features for QB (average shape, peak current average value and variance, the latency distribution, etc.), arrestin mutant behaviour, low extracellular Ca2+ cases, etc. The TRP channel activity is modeled by a Monod-Wyman-Changeux (MWC) model for allosteric interaction, instead of using the usual ad hoc Hill equation. This approach allows for a plausible physical explanation of how Ca/calmodulin regulate the protein activity. The cooperative nature of the TRP channel activation leads to "dark current" suppression at the output allowing for reliable detection of a single photon. Stochastic simulations were produced by using the standard rate equations combined with the Poisson distribution for generating random events from the forward and reverse reaction rates. Noise is inherent to the system but appears to be crucial for producing such reliable responses in this complex, highly non-linear system. The approach presented here may serve as a useful example how to treat complex cellular mechanisms underlying sensory processes.
引用
收藏
页码:354 / 370
页数:17
相关论文
共 63 条
[1]  
[Anonymous], 2008, SENSES COMPREHENSIVE
[2]  
[Anonymous], 2004, BIOPHYSICS COMPUTATI
[3]  
ARSHAVSKY VY, 2003, SCI STKE, V204, pPE43
[4]   Diffusion of the second messengers in the cytoplasm acts as a variability suppressor of the single photon response in vertebrate phototransduction [J].
Bisegna, Paolo ;
Caruso, Giovanni ;
Andreucci, Daniele ;
Shen, Lixin ;
Gurevich, Vsevolod V. ;
Hamm, Heidi E. ;
DiBenedetto, Emmanuele .
BIOPHYSICAL JOURNAL, 2008, 94 (09) :3363-3383
[5]   Diacylglycerol, when simplicity becomes complex [J].
Carrasco, Silvia ;
Merida, Isabel .
TRENDS IN BIOCHEMICAL SCIENCES, 2007, 32 (01) :27-36
[6]   Allosteric mechanisms of signal transduction [J].
Changeux, JP ;
Edelstein, SJ .
SCIENCE, 2005, 308 (5727) :1424-1428
[7]   Low mobility of phosphatidylinositol 4,5-bisphosphate underlies receptor specificity of Gq-mediated ion channel regulation in atrial myocytes [J].
Cho, H ;
Kim, YA ;
Yoon, JY ;
Lee, D ;
Kim, JH ;
Lee, SH ;
Ho, WK .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2005, 102 (42) :15241-15246
[8]   Polyunsaturated fatty acids activate the Drosophila light-sensitive channels TRP and TRPL [J].
Chyb, S ;
Raghu, P ;
Hardie, RC .
NATURE, 1999, 397 (6716) :255-259
[9]   The G-protein nanomachine [J].
Clapham, DE .
NATURE, 1996, 379 (6563) :297-299
[10]   Phospholipase C and termination of G-protein-mediated signalling in vivo [J].
Cook, B ;
Bar-Yaacov, M ;
Ben-Ami, HC ;
Goldstein, RE ;
Paroush, Z ;
Selinger, Z ;
Minke, B .
NATURE CELL BIOLOGY, 2000, 2 (05) :296-301