Efficiency of Single Nucleotide Polymorphisms to improve a genetic map of complex pedigree grapevines

被引:0
|
作者
Zyprian, E. [1 ]
Simon, S. [1 ]
Schwander, F. [1 ]
Toepfer, R. [1 ]
机构
[1] Inst Grapevine Breeding Geilweilerhof, Fed Inst Cultivated Plants, Julius Kuhn Inst, D-76833 Siebeldingen, Germany
关键词
genetic mapping; SNP markers; GENUS VITIS; RESISTANCE; SEQUENCE; VARIETY; GENOME; LOCI;
D O I
暂无
中图分类号
S6 [园艺];
学科分类号
0902 ;
摘要
A set of 47 SNP (single nucleotide polymorphisms) markers (CABEzAs et al. 2011) was tested for their usefulness to improve a genetic map from the cross of GF.GA-52-42 x 'Solaris' previously established with SSR markers (SCHWANDER et al. 2012). 55.3 % of the SNPs showed informative segregation and 26 SNP markers were localized on 16 of the 19 linkage groups of grapevine. Five chromosome regions with large gaps of recombining SSR markers could be equipped by positioning a SNP marker there. One SNP marker, VV10992, was found linked to the major resistance locus Rpv10 and should be applicable for marker-assisted selection.
引用
收藏
页码:29 / 32
页数:4
相关论文
共 50 条
  • [31] Single nucleotide polymorphisms for feed efficiency and performance in crossbred beef cattle
    Abo-Ismail, Mohammed K.
    Vander Voort, Gordon
    Squires, James J.
    Swanson, Kendall C.
    Mandell, Ira B.
    Liao, Xiaoping
    Stothard, Paul
    Moore, Stephen
    Plastow, Graham
    Miller, Stephen P.
    BMC GENETICS, 2014, 15
  • [32] Single nucleotide polymorphisms and haplotypes associated with feed efficiency in beef cattle
    Serao, Nick V. L.
    Gonzalez-Pena, Dianelys
    Beever, Jonathan E.
    Faulkner, Dan B.
    Southey, Bruce R.
    Rodriguez-Zas, Sandra L.
    BMC GENETICS, 2013, 14
  • [33] Single nucleotide polymorphisms and haplotypes associated with feed efficiency in beef cattle
    Nick VL Serão
    Dianelys González-Peña
    Jonathan E Beever
    Dan B Faulkner
    Bruce R Southey
    Sandra L Rodriguez-Zas
    BMC Genetics, 14
  • [34] Single nucleotide polymorphisms for feed efficiency and performance in crossbred beef cattle
    Mohammed K Abo-Ismail
    Gordon Vander Voort
    James J Squires
    Kendall C Swanson
    Ira B Mandell
    Xiaoping Liao
    Paul Stothard
    Stephen Moore
    Graham Plastow
    Stephen P Miller
    BMC Genetics, 15
  • [35] Bayesian pedigree inference with small numbers of single nucleotide polymorphisms via a factor-graph representation
    Anderson, Eric C.
    Ng, Thomas C.
    THEORETICAL POPULATION BIOLOGY, 2016, 107 : 39 - 51
  • [36] Flexible methods for estimating genetic distances from single nucleotide polymorphisms
    Joly, Simon
    Bryant, David
    Lockhart, Peter J.
    METHODS IN ECOLOGY AND EVOLUTION, 2015, 6 (08): : 938 - 948
  • [37] Single nucleotide polymorphisms -: Minor genetic variants -: Major medical effects
    Fòernzler, D
    NACHRICHTEN AUS DER CHEMIE, 2000, 48 (11) : 1342 - 1347
  • [38] Genetic Association of Single Nucleotide Polymorphisms with Acetaminophen-Induced Hepatotoxicity
    Heruth, Daniel P.
    Shortt, Katherine
    Zhang, Nini
    Li, Ding-You
    Zhang, Li Q.
    Ye, Shui Qing
    JOURNAL OF PHARMACOLOGY AND EXPERIMENTAL THERAPEUTICS, 2018, 367 (01): : 95 - 100
  • [39] Genetic influences of beta adrenoceptor single nucleotide polymorphisms on hypertensive complications
    Ohishi, M
    Yuan, M
    Ito, N
    Sugimoto, K
    Kaibe, M
    Takagi, T
    Fu, Y
    Katsuya, T
    Rakugi, H
    Ogihara, T
    JOURNAL OF HYPERTENSION, 2004, 22 : S345 - S345
  • [40] Genetic diversity of Eurycoma longifolia inferred from single nucleotide polymorphisms
    Osman, A
    Jordan, B
    Lessard, PA
    Muhammad, N
    Haron, MR
    Riffin, NM
    Sinskey, AJ
    Rha, C
    Housman, DE
    PLANT PHYSIOLOGY, 2003, 131 (03) : 1294 - 1301