Biosynthetic Gene Cluster of a D-Tryptophan-Containing Lasso Peptide, MS-271

被引:40
作者
Feng, Zhi [1 ]
Ogasawara, Yasushi [1 ]
Nomura, Satoshi [1 ]
Dairi, Tohru [1 ]
机构
[1] Hokkaido Univ, Grad Sch Engn, Sapporo, Hokkaido 0608628, Japan
关键词
antibiotics; biosynthesis; D-amino acids; epimerases; lasso peptides; DISULFIDE BOND FORMATION; NATRIURETIC-FACTOR ANF; LIGHT-CHAIN KINASE; ESCHERICHIA-COLI; NATURAL-PRODUCTS; STREPTOMYCES SP; ANTAGONIST; MATURATION; INHIBITOR; GLUTAMATE;
D O I
10.1002/cbic.201800315
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
MS-271, produced by Streptomyces sp. M-271, is a lasso peptide natural product comprising 21 amino acid residues with a D-tryptophan at its C terminus. Because lasso peptides are ribosomal peptides, the biosynthesis of MS-271, especially the mechanism of D-Trp introduction, is of great interest. The MS-271 biosynthetic gene cluster was identified by draft genome sequencing of the MS-271 producer, and it was revealed that the precursor peptide contains all 21 amino acid residues including the C-terminal tryptophan. This suggested that the D-Trp residue is introduced by epimerization. Genes for modification enzymes such as a macrolactam synthetase (mslC), precursor peptide recognition element (mslB1), cysteine protease (mslB2), disulfide oxidoreductases (mslE, mslF), and a protein of unknown function (mslH) were found in the flanking region of the precursor peptide gene. Although obvious epimerase genes were absent in the cluster, heterologous expression of the putative MS-271 cluster in Streptomyces lividans showed that it contains all the necessary genes for MS-271 production including a gene for a new peptide epimerase. Furthermore, a gene-deletion experiment indicated that MslB1, -B2, -C and -H were indispensable for MS-271 production and that some interactions of the biosynthetic enzymes were essential for the biosynthesis of MS-271.
引用
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页码:2045 / 2048
页数:4
相关论文
共 24 条
[1]   Ribosomally synthesized and post-translationally modified peptide natural products: overview and recommendations for a universal nomenclature [J].
Arnison, Paul G. ;
Bibb, Mervyn J. ;
Bierbaum, Gabriele ;
Bowers, Albert A. ;
Bugni, Tim S. ;
Bulaj, Grzegorz ;
Camarero, Julio A. ;
Campopiano, Dominic J. ;
Challis, Gregory L. ;
Clardy, Jon ;
Cotter, Paul D. ;
Craik, David J. ;
Dawson, Michael ;
Dittmann, Elke ;
Donadio, Stefano ;
Dorrestein, Pieter C. ;
Entian, Karl-Dieter ;
Fischbach, Michael A. ;
Garavelli, John S. ;
Goeransson, Ulf ;
Gruber, Christian W. ;
Haft, Daniel H. ;
Hemscheidt, Thomas K. ;
Hertweck, Christian ;
Hill, Colin ;
Horswill, Alexander R. ;
Jaspars, Marcel ;
Kelly, Wendy L. ;
Klinman, Judith P. ;
Kuipers, Oscar P. ;
Link, A. James ;
Liu, Wen ;
Marahiel, Mohamed A. ;
Mitchell, Douglas A. ;
Moll, Gert N. ;
Moore, Bradley S. ;
Mueller, Rolf ;
Nair, Satish K. ;
Nes, Ingolf F. ;
Norris, Gillian E. ;
Olivera, Baldomero M. ;
Onaka, Hiroyasu ;
Patchett, Mark L. ;
Piel, Joern ;
Reaney, Martin J. T. ;
Rebuffat, Sylvie ;
Ross, R. Paul ;
Sahl, Hans-Georg ;
Schmidt, Eric W. ;
Selsted, Michael E. .
NATURAL PRODUCT REPORTS, 2013, 30 (01) :108-160
[2]   Microbial production and chemical transformation of poly-γ-glutamate [J].
Ashiuchi, Makoto .
MICROBIAL BIOTECHNOLOGY, 2013, 6 (06) :664-674
[3]   A prevalent peptide-binding domain guides ribosomal natural product biosynthesis [J].
Burkhart, Brandon J. ;
Hudson, Graham A. ;
Dunbar, Kyle L. ;
Mitchell, Douglas A. .
NATURE CHEMICAL BIOLOGY, 2015, 11 (08) :564-U56
[4]   The Streptomyces genome contains multiple pseudo-attB sites for the φC31-encoded site-specific recombination system [J].
Combes, P ;
Till, R ;
Bee, S ;
Smith, MCM .
JOURNAL OF BACTERIOLOGY, 2002, 184 (20) :5746-5752
[5]   Two enzymes catalyze the maturation of a lasso peptide in Escherichia coli [J].
Duquesne, Sophie ;
Destoumieux-Garzon, Delphine ;
Zirah, Severine ;
Goulard, Christophe ;
Peduzzi, Jean ;
Rebuffat, Sylvie .
CHEMISTRY & BIOLOGY, 2007, 14 (07) :793-803
[6]   A Glycopeptidyl-Glutamate Epimerase for Bacterial Peptidoglycan Biosynthesis [J].
Feng, Ruoyin ;
Satoh, Yasuharu ;
Ogasawara, Yasushi ;
Yoshimura, Tohru ;
Dairi, Tohru .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2017, 139 (12) :4243-4245
[7]   Metagenome Mining Reveals Polytheonamides as Posttranslationally Modified Ribosomal Peptides [J].
Freeman, Michael F. ;
Gurgui, Cristian ;
Helf, Maximilian J. ;
Morinaka, Brandon I. ;
Uria, Agustinus R. ;
Oldham, Neil J. ;
Sahl, Hans-Georg ;
Matsunaga, Shigeki ;
Piel, Joern .
SCIENCE, 2012, 338 (6105) :387-390
[8]   Diversity of structure and function of response regulator output domains [J].
Galperin, Michael Y. .
CURRENT OPINION IN MICROBIOLOGY, 2010, 13 (02) :150-159
[9]   Lasso Peptides: An Intriguing Class of Bacterial Natural Products [J].
Hegemann, Julian D. ;
Zimmermann, Marcel ;
Xie, Xiulan ;
Marahiel, Mohamed A. .
ACCOUNTS OF CHEMICAL RESEARCH, 2015, 48 (07) :1909-1919
[10]   REGULATION OF SECONDARY METABOLISM AND CELL-DIFFERENTIATION IN STREPTOMYCES - A-FACTOR AS A MICROBIAL HORMONE AND THE AFSR PROTEIN AS A COMPONENT OF A 2-COMPONENT REGULATORY SYSTEM [J].
HORINOUCHI, S ;
BEPPU, T .
GENE, 1992, 115 (1-2) :167-172