The complete mitochondrial genome of the swimming crab Charybdis natator (Herbst) (Decapoda: Brachyura: Portunidae) and its phylogeny

被引：7

作者：

Yang, Xiaolong ^{[1
]}

Ma, Hongyu ^{[1
]}

Waiho, Khor ^{[1
]}

Fazhan, Hanafiah ^{[1
]}

Wang, Shuqi ^{[1
]}

Wu, Qingyang ^{[1
]}

Shi, Xi ^{[1
]}

You, Cuihong ^{[1
]}

Lu, Jianxue ^{[2
]}

机构：

[1] Shantou Univ, Guangdong Prov Key Lab Marine Biotechnol, Shantou, Peoples R China

[2] Chinese Acad Fishery Sci, East China Sea Fisheries Res Inst, Shanghai, Peoples R China

来源：

MITOCHONDRIAL DNA PART B-RESOURCES | 2017年 / 2卷 / 02期

关键词：

Charybdis natator; gene arrangement; genome structure; mitochondrial genome; phylogeny; MUD CRAB; SCYLLA;

D O I：

10.1080/23802359.2017.1365639

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

The complete mitochondrial genome of Charybdis natator (family Portunidae) was obtained using Illumina and Sanger dideoxy sequencing. This genome was a typically circular molecule with a length of 15,664 bp and encoded 13 protein-coding genes, 22 transfer RNA genes and 2 ribosomal RNA genes. The overall base composition of this mitogenome was 34.00% for A, 11.06% for G, 36.36% for T, and 18.58% for C, respectively, with a higher A + T content (70.36%). The gene composition and arrangement were accordant to the closely published species. The phylogenetic analysis suggested that C. natator had the closest relationship with C. japonica.

引用

页码：530 / 531

页数：2

共 9 条

[1]

Azra M. N., 2015, Songklanakarin Journal of Science and Technology, V37, P135

[2] The complete mitochondrial genome of the Asian stinging catfish, Heteropneustes fossilis (Siluriformes, Heteropneustidae) and its comparison with other related fish species [J].

Behera, Bijay Kumar ;

Baisvar, Vishwamitra Singh ;

Kumari, Kavita ;

Rout, Ajaya Kumar ;

Pakrashi, Sudip ;

Paria, Prasenjet ;

Das, Abhishek ;

Rao, A. R. ;

Rai, Anil .

MITOCHONDRIAL DNA PART B-RESOURCES, 2016, 1 (01) :804-805

[3] Inter-species mating among mud crab genus Scylla in captivity [J].

Fazhan, Hanafiah ;

Waiho, Khor ;

Norfaizza, Wan Ibrahim Wan ;

Megat, Fadhlul Hazmi ;

Ikhwanuddin, Mhd .

AQUACULTURE, 2017, 471 :49-54

[4] Biological information and population features of mud crab, genus Scylla from mangrove areas of Sarawak, Malaysia [J].

Ikhwanuddin, M. ;

Azmie, G. ;

Juariah, H. M. ;

Zakaria, M. Z. ;

Ambak, M. A. .

FISHERIES RESEARCH, 2011, 108 (2-3) :299-306

[5]

Islam Md. Sirajul, 2000, Species Diversity, V5, P329

[6] Complete mitochondrial genome of the Asian paddle crab Charybdis japonica (Crustacea: Decapoda: Portunidae): gene rearrangement of the marine brachyurans and phylogenetic considerations of the decapods [J].

Liu, Yuan ;

Cui, Zhaoxia .

MOLECULAR BIOLOGY REPORTS, 2010, 37 (05) :2559-2569

[7] First mitochondrial genome for the red crab (Charybdis feriata) with implication of phylogenomics and population genetics [J].

Ma, Hongyu ;

Ma, Chunyan ;

Li, Chenhong ;

Lu, Jianxue ;

Zou, Xiong ;

Gong, Yangyang ;

Wang, Wei ;

Chen, Wei ;

Ma, Lingbo ;

Xia, Lianjun .

SCIENTIFIC REPORTS, 2015, 5

[8] Size distribution, length-weight relationship and size at the onset of sexual maturity of the orange mud crab, Scylla olivacea, in Malaysian waters [J].

Waiho, Khor ;

Fazhan, Hanafiah ;

Ikhwanuddin, Mhd .

MARINE BIOLOGY RESEARCH, 2016, 12 (07) :726-738

[9]

Wee DPC, 1995, RAFFLES B ZOOL, P1

← 1 →