Species identification by means of pyrosequencing the mitochondrial 12S rRNA gene

被引:57
作者
Balitzki-Korte, B
Anslinger, K
Bartsch, C
Rolf, B
机构
[1] Univ Hosp Giessen, Dept Legal Med, D-35392 Giessen, Germany
[2] Univ Munich, Dept Legal Med, Munich, Germany
关键词
species identification; pyrosequencing; mitochondrial DNA; sequence analysis; 12S rRNA gene;
D O I
10.1007/s00414-005-0537-9
中图分类号
DF [法律]; D9 [法律]; R [医药、卫生];
学科分类号
0301 ; 10 ;
摘要
The aim of this study was to develop a new method for species identification based on the analysis of a very short nucleotide sequence. For this reason, the mitochondrial 12S rRNA gene, together with the new method of pyrosequencing, was used. The detection of only 20 nucleotides, following the sequencing primer within a 149-bp fragment by pyrosequencing, was sufficient to identify the biological origin of the samples by alignment with a reference sequence database. A case example with a piece of skin is presented, and the question whether this piece of skin came from a missing wife or from an animal could be answered.
引用
收藏
页码:291 / 294
页数:4
相关论文
共 15 条
  • [1] SEQUENCE AND ORGANIZATION OF THE HUMAN MITOCHONDRIAL GENOME
    ANDERSON, S
    BANKIER, AT
    BARRELL, BG
    DEBRUIJN, MHL
    COULSON, AR
    DROUIN, J
    EPERON, IC
    NIERLICH, DP
    ROE, BA
    SANGER, F
    SCHREIER, PH
    SMITH, AJH
    STADEN, R
    YOUNG, IG
    [J]. NATURE, 1981, 290 (5806) : 457 - 465
  • [2] Identification of the skeletal remains of Martin Bormann by mtDNA analysis
    Anslinger, K
    Weichhold, G
    Keil, W
    Bayer, B
    Eisenmenger, W
    [J]. INTERNATIONAL JOURNAL OF LEGAL MEDICINE, 2001, 114 (03) : 194 - 196
  • [3] Reconstructing an island radiation using ancient and recent DNA:: the extinct and living day geckos (Phelsuma) of the Mascarene islands
    Austin, JJ
    Arnold, EN
    Jones, CG
    [J]. MOLECULAR PHYLOGENETICS AND EVOLUTION, 2004, 31 (01) : 109 - 122
  • [4] Systematic relationships among Lutzomyia sand flies (Diptera: Psychodidae) of Peru and Colombia based on the analysis of 12S and 28S ribosomal DNA sequences
    Beati, L
    Cáceres, AG
    Lee, JA
    Munstermann, LE
    [J]. INTERNATIONAL JOURNAL FOR PARASITOLOGY, 2004, 34 (02) : 225 - 234
  • [5] Chikuni Koichi, 1994, Animal Science and Technology, V65, P571
  • [6] FORREST ARR, 1994, BIOTECHNIQUES, V17, P24
  • [7] STRUCTURE OF RIBOSOMAL-RNA
    NOLLER, HF
    [J]. ANNUAL REVIEW OF BIOCHEMISTRY, 1984, 53 : 119 - 162
  • [8] Species identification by means of the cytochrome b gene
    Parson, W
    Pegoraro, K
    Niederstätter, H
    Föger, M
    Steinlechner, M
    [J]. INTERNATIONAL JOURNAL OF LEGAL MEDICINE, 2000, 114 (1-2) : 23 - 28
  • [9] The Kaiser's tooth
    Pfeiffer, H
    Benthaus, S
    Rolf, B
    Brinkmann, B
    [J]. INTERNATIONAL JOURNAL OF LEGAL MEDICINE, 2003, 117 (02) : 118 - 120
  • [10] Pyrosequencing sheds light on DNA sequencing
    Ronaghi, M
    [J]. GENOME RESEARCH, 2001, 11 (01) : 3 - 11