Electrostatic interactions in the denatured state ensemble: Their effect upon protein folding and protein stability

被引:41
|
作者
Cho, Jae-Hyun [2 ]
Sato, Satoshi [3 ]
Horng, Jia-Cherng [4 ]
Anil, Burcu [1 ]
Raleigh, Daniel P. [1 ,5 ]
机构
[1] SUNY Stony Brook, Dept Chem, Stony Brook, NY 11794 USA
[2] Columbia Univ, Dept Biochem & Mol Biophys, New York, NY 10032 USA
[3] Okayama Res Pk Incubat Ctr, Okayama 7011221, Japan
[4] Natl Tsing Hua Univ, Dept Chem, Hsinchu 30013, Taiwan
[5] SUNY Stony Brook, Grad Program Biochem & Struct Biol, Grad Program Biophys, Stony Brook, NY 11794 USA
关键词
denatured state ensemble; unfolded state; protein stability; protein folding; protein engineering; ribosomal protein L9; electrostatic interactions; protein design; pH titration; thermodynamic linkage;
D O I
10.1016/j.abb.2007.08.004
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
It is now recognized that the denatured state ensemble (DSE) of proteins can contain significant amounts of structure, particularly under native conditions. Well-studied examples include small units of hydrogen bonded secondary structure, particularly helices or turns as well as hydrophobic clusters. Other types of interactions are less well characterized and it has often been assumed that electrostatic interactions play at most a minor role in the DSE. However, recent studies have shown that both favorable and unfavorable electrostatic interactions can be formed in the DSE. These can include surprisingly specific non-native interactions that can even persist in the transition state for protein folding. DSE electrostatic interactions can be energetically significant and their modulation either by mutation or by varying solution conditions can have a major impact upon protein stability. pH dependent stability studies have shown that electrostatic interactions can contribute up to 4 kcal mol(-1) to the stability of the DSE. (C) 2007 Elsevier Inc. All rights reserved.
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页码:20 / 28
页数:9
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