Characteristics of the complete chloroplast genome sequences of Stylidium debile and Stylidium petiolare (Stylidiaceae)

被引:2
作者
Li, Lin [1 ,2 ]
Liu, Guo-Ming [3 ]
Zhang, Zhi-Rong [4 ]
Corlett, Richard T. [1 ,2 ]
Yu, Wen-Bin [1 ,2 ,5 ]
机构
[1] Chinese Acad Sci, Ctr Integrat Conservat, Xishuangbanna Trop Bot Garden, Menglun, Yunnan, Peoples R China
[2] Chinese Acad Sci, Ctr Conservat Biol, Core Bot Gardens, Menglun, Peoples R China
[3] Chinese Carnivorous Plants Garden, Tongxiang, Peoples R China
[4] Chinese Acad Sci, Kunming Inst Bot, Germplasm Bank Wild Species, Kunming, Yunnan, Peoples R China
[5] Chinese Acad Sci, Southeast Asia Biodivers Res Inst, Nay Pyi Taw, Myanmar
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2021年 / 6卷 / 11期
关键词
Chloroplast genome; plastome; Stylidium debile; Stylidium petiolare; Stylidiaceae;
D O I
10.1080/23802359.2021.1985403
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
We report complete chloroplast genome (plastome) sequences of Stylidium debile (150,105 bp) and Stylidium petiolare (150,998 bp). Both plastomes had the typical quadripartite structure, with large single-copy (LSC) and small single-copy (SSC) regions separated by two inverted repeat (IR) regions. Both plastomes have lost the rps19 and ycf15 CDS genes, and had infA-like, rps22-like, and rps7-like pseudogenes. Moreover, IR regions were expanded by having trnH (GUG) tRNA and the rps22-like pseudogene. Plastome phylogenomic analyses showed that the two Stylidium species formed a monophyletic clade (BS = 100), sister to the Argophyllaceae (BS = 86/83). Sequence differences between the two Stylidium plastomes were 5011 sites, including 2166 variable sites and 2845 indels, with the petA-psbJ spacer the most variable region, followed by the trnK (UUU)-matK intron and trnG (UUG)-rps16 spacer.
引用
收藏
页码:3134 / 3136
页数:3
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