Filament Rigidity Vies with Mesh Size in Determining Anomalous Diffusion in Cytoskeleton

被引:21
作者
Anderson, Sylas J. [1 ]
Matsuda, Christelle [1 ]
Garamella, Jonathan [1 ]
Peddireddy, Karthik Reddy [1 ]
Robertson-Anderson, Rae M. [1 ]
McGorty, Ryan [1 ]
机构
[1] Univ San Diego, Dept Phys & Biophys, San Diego, CA 92110 USA
关键词
MULTIPLE-PARTICLE TRACKING; ACTIN; DYNAMICS; SUBDIFFUSION; NANOPARTICLES; MICRORHEOLOGY; MICROTUBULES; TRANSPORT; PROTEINS; IMPACT;
D O I
10.1021/acs.biomac.9b01057
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The diffusion of microscopic particles through the cell, important to processes such as viral infection, gene delivery, and vesicle transport, is largely controlled by the complex cytoskeletal network, comprised of semiflexible actin filaments and rigid microtubules, that pervades the cytoplasm. By varying the relative concentrations of actin and micro tubules, the cytoskeleton can display a host of different structural and dynamic properties that, in turn, impact the diffusion of particles through the composite network. Here, we couple single-particle tracking with differential dynamic microscopy to characterize the transport of microsphere tracers diffusing through composite in vitro networks with varying ratios of actin and microtubules. We analyze multiple complementary metrics for anomalous transport to show that particles exhibit anomalous subdiffusion in all networks, which our data suggest arises from caging by networks. Further, subdiffusive characteristics are markedly more pronounced in actin rich networks, which exhibit similarly more prominent viscoelastic properties compared to microtubule-rich composites. While the smaller mesh size of actin-rich composites compared to microtubule-rich composites plays an important role in these results, the rigidity of the filaments comprising the network also influences the anomalous characteristics that we observe. Our results suggest that as microtubules in our composites are replaced with actin filaments, the decreasing filament rigidity competes with increasing network connectivity to drive anomalous transport.
引用
收藏
页码:4380 / 4388
页数:9
相关论文
共 63 条
  • [1] Alberti C, 2009, EUR REV MED PHARMACO, V13, P13
  • [2] A general phenomenological relation for the subdiffusive exponent of anomalous diffusion in disordered media
    Alcazar-Cano, Nerea
    Delgado-Buscalioni, Rafael
    [J]. SOFT MATTER, 2018, 14 (48) : 9937 - 9949
  • [3] Subdiffusion and anomalous local viscoelasticity in actin networks
    Amblard, F
    Maggs, AC
    Yurke, B
    Pargellis, AN
    Leibler, S
    [J]. PHYSICAL REVIEW LETTERS, 1996, 77 (21) : 4470 - 4473
  • [4] Anomalous diffusion of proteins due to molecular crowding
    Banks, DS
    Fradin, C
    [J]. BIOPHYSICAL JOURNAL, 2005, 89 (05) : 2960 - 2971
  • [5] Probe microrheology without particle tracking by differential dynamic microscopy
    Bayles, Alexandra V.
    Squires, Todd M.
    Helgeson, Matthew E.
    [J]. RHEOLOGICA ACTA, 2017, 56 (11) : 863 - 869
  • [6] EFFECT OF CYTOSKELETAL GEOMETRY ON INTRACELLULAR DIFFUSION
    BLUM, JJ
    LAWLER, G
    REED, M
    SHIN, I
    [J]. BIOPHYSICAL JOURNAL, 1989, 56 (05) : 995 - 1005
  • [7] BRAET F, 1995, HEPATOLOGY, V21, P180, DOI 10.1002/hep.1840210130
  • [8] Crowding Induces Complex Ergodic Diffusion and Dynamic Elongation of Large DNA Molecules
    Chapman, Cole D.
    Gorczyca, Stephanie
    Robertson-Anderson, Rae M.
    [J]. BIOPHYSICAL JOURNAL, 2015, 108 (05) : 1220 - 1228
  • [9] Influence of polymer flexibility on nanoparticle dynamics in semidilute solutions
    Chen, Renjie
    Poling-Skutvik, Ryan
    Howard, Michael P.
    Nikoubashman, Arash
    Egorov, Sergei A.
    Conrad, Jacinta C.
    Palmer, Jeremy C.
    [J]. SOFT MATTER, 2019, 15 (06) : 1260 - 1268
  • [10] Anomalous diffusion and ergodicity breaking in heterogeneous diffusion processes
    Cherstvy, Andrey G.
    Chechkin, Aleksei V.
    Metzler, Ralf
    [J]. NEW JOURNAL OF PHYSICS, 2013, 15