Molecular basis for optical clearing of collagenous tissues

被引:63
作者
Hirshburg, Jason M. [1 ]
Ravikumar, Krishnakumar M. [1 ]
Hwang, Wonmuk [1 ]
Yeh, Alvin T. [1 ]
机构
[1] Texas A&M Univ, Dept Biomed Engn, College Stn, TX 77843 USA
基金
美国国家科学基金会;
关键词
collagen; hydrogen bond bridge; hyperosmotic agent; molecular dynamics simulations; sugar-alcohol; sugar; TRIPLE-HELICAL PEPTIDES; DIMETHYL-SULFOXIDE; PERICARDIUM TISSUE; GLUTARALDEHYDE; DYNAMICS; SIMULATION; MICROSCOPY; PROTEINS; SUGARS; MODEL;
D O I
10.1117/1.3484748
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Molecular interactions of optical clearing agents were investigated using a combination of molecular dynamics (MD) simulations and optical spectroscopy. For a series of sugar alcohols with low to high optical clearing potential, Raman spectroscopy and integrating sphere measurements were used to quantitatively characterize tissue water loss and reduction in light scattering following agent exposures. The rate of tissue water loss was found to correlate with agent optical clearing potential, but equivalent tissue optical clearing was measured in native and fixed tissue in vitro, given long-enough exposure times to the polyol series. MD simulations showed that the rate of tissue optical clearing correlated with the preferential formation of hydrogen bond bridges between agent and collagen. Hydrogen bond bridge formation disrupts the collagen hydration layer and facilitates replacement by a chemical agent to homogenize tissue refractive index. However, the reduction in tissue light scattering did not correlate with the agent index of refraction. Our results suggest that a necessary property of optical clearing agents is hyperosmolarity to tissue, but that the most effective agents with the highest rates of optical clearing are a subset with the highest collagen solubilities. (C) 2010 Society of Photo-Optical Instrumentation Engineers. [DOI: 10.1117/1.3484748]
引用
收藏
页数:8
相关论文
共 32 条
[1]  
Allen M. P., 1987, COMPUTER SIMULATION
[2]  
ANDERSON D, 2005, THESIS U TORONTO
[3]   CHARMM: The Biomolecular Simulation Program [J].
Brooks, B. R. ;
Brooks, C. L., III ;
Mackerell, A. D., Jr. ;
Nilsson, L. ;
Petrella, R. J. ;
Roux, B. ;
Won, Y. ;
Archontis, G. ;
Bartels, C. ;
Boresch, S. ;
Caflisch, A. ;
Caves, L. ;
Cui, Q. ;
Dinner, A. R. ;
Feig, M. ;
Fischer, S. ;
Gao, J. ;
Hodoscek, M. ;
Im, W. ;
Kuczera, K. ;
Lazaridis, T. ;
Ma, J. ;
Ovchinnikov, V. ;
Paci, E. ;
Pastor, R. W. ;
Post, C. B. ;
Pu, J. Z. ;
Schaefer, M. ;
Tidor, B. ;
Venable, R. M. ;
Woodcock, H. L. ;
Wu, X. ;
Yang, W. ;
York, D. M. ;
Karplus, M. .
JOURNAL OF COMPUTATIONAL CHEMISTRY, 2009, 30 (10) :1545-1614
[4]   POLAR HYDROGEN POSITIONS IN PROTEINS - EMPIRICAL ENERGY PLACEMENT AND NEUTRON-DIFFRACTION COMPARISON [J].
BRUNGER, AT ;
KARPLUS, M .
PROTEINS-STRUCTURE FUNCTION AND GENETICS, 1988, 4 (02) :148-156
[5]   Revisiting Optical Clearing With Dimethyl Sulfoxide (DMSO) [J].
Bui, Albert K. ;
McClure, R. Anthony ;
Chang, Jennell ;
Stoianovici, Charles ;
Hirshburg, Jason ;
Yeh, Alvin T. ;
Choi, Bernard .
LASERS IN SURGERY AND MEDICINE, 2009, 41 (02) :142-148
[6]   MECHANISM OF CROSSLINKING OF PROTEINS BY GLUTARALDEHYDE .3. REACTION WITH COLLAGEN IN TISSUES [J].
CHEUNG, DT ;
PERELMAN, N ;
KO, EC ;
NIMNI, ME .
CONNECTIVE TISSUE RESEARCH, 1985, 13 (02) :109-115
[7]   MOLECULAR-DYNAMICS SIMULATION OF GALANIN IN AQUEOUS AND NONAQUEOUS SOLUTION [J].
DELOOF, H ;
NILSSON, L ;
RIGLER, R .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1992, 114 (11) :4028-4035
[8]   Correlation between collagen solubility and skin optical clearing using sugars [J].
Hirshburg, Jason ;
Choi, Bernard ;
Nelson, J. Stuart ;
Yeh, Alvin T. .
LASERS IN SURGERY AND MEDICINE, 2007, 39 (02) :140-144
[9]   Collagen solubility correlates with skin optical clearing [J].
Hirshburg, Jason ;
Choi, Bernard ;
Nelson, J. Stuart ;
Yeh, Alvin T. .
JOURNAL OF BIOMEDICAL OPTICS, 2006, 11 (04)
[10]   Generalized born model with a simple smoothing function [J].
Im, WP ;
Lee, MS ;
Brooks, CL .
JOURNAL OF COMPUTATIONAL CHEMISTRY, 2003, 24 (14) :1691-1702