Two genomes of highly polyphagous lepidopteran pests (Spodoptera frugiperda, Noctuidae) with different host-plant ranges

被引：246

作者：

Gouin, Anais ^{[1
]}

Bretaudeau, Anthony ^{[2
,3
]}

Nam, Kiwoong ^{[4
]}

Gimenez, Sylvie ^{[4
]}

Aury, Jean-Marc ^{[5
]}

Duvic, Bernard ^{[4
]}

Hilliou, Frederique ^{[6
]}

Durand, Nicolas ^{[7
]}

Montagne, Nicolas ^{[7
]}

Darboux, Isabelle ^{[4
]}

Kuwar, Suyog ^{[8
]}

Chertemps, Thomas ^{[7
]}

Siaussat, David ^{[7
]}

Bretschneider, Anne ^{[8
]}

Mone, Yves ^{[4
]}

Ahn, Seung-Joon ^{[8
]}

Haenniger, Sabine ^{[8
]}

Grenet, Anne-Sophie Gosselin ^{[4
]}

Neunemann, David ^{[8
]}

Maumus, Florian ^{[9
]}

Luyten, Isabelle ^{[9
]}

Labadie, Karine ^{[5
]}

Xu, Wei ^{[11
]}

Koutroumpa, Fotini ^{[12
,16
]}

Escoubas, Jean-Michel ^{[4
]}

Llopis, Angel ^{[13
,14
]}

Maibeche-Coisne, Martine

Salasc, Fanny ^{[15
]}

Tomar, Archana ^{[16
]}

Anderson, Alisha R. ^{[10
]}

Khan, Sher Afzal ^{[8
]}

Dumas, Pascaline ^{[17
]}

Orsucci, Marion ^{[4
]}

Guy, Julie ^{[5
]}

Belser, Caroline ^{[5
]}

Alberti, Adriana ^{[5
]}

Noel, Benjamin ^{[5
]}

Couloux, Arnaud ^{[5
]}

Mercier, Jonathan ^{[5
]}

Nidelet, Sabine ^{[18
]}

Dubois, Emeric ^{[18
]}

Liu, Nai-Yong ^{[19
]}

Boulogne, Isabelle ^{[7
]}

Mirabeau, Olivier ^{[12
]}

Le Goff, Gaelle ^{[6
]}

Gordon, Karl ^{[20
]}

Oakeshott, John ^{[20
]}

Consoli, Fernando L. ^{[21
]}

Volkoff, Anne-Nathalie ^{[4
]}

Fescemyer, Howard W. ^{[22
]}

机构：

[1] INRIA, IRISA, GenScale, Campus Beaulieu, F-35042 Rennes, France

[2] INRA, UMR IGEPP, BIPAA, Campus Beaulieu, F-35042 Rennes, France

[3] INRIA, IRISA, GenOuest Core Facil, Campus Beaulieu, F-35042 Rennes, France

[4] Univ Montpellier, INRA, DGIMI, F-34095 Montpellier, France

[5] CEA, Genoscope, 2 Rue Gaston, Evry, France

[6] Univ Cote Azur, INRA, CNRS, Inst Sophia Agrobiotech, F-06903 Sophia Antipolis, France

[7] UPMC Univ Paris 06, Sorbonne Univ, Inst Ecol & Environm Sci Paris, F-75005 Paris, France

[8] Max Planck Inst Chem Ecol, Dept Entomol, D-07745 Jena, Germany

[9] Univ Paris Saclay, INRA, URGI, F-78026 Versailles, France

[10] CSIRO Ecosyst Sci, Canberra, ACT 2600, Australia

[11] Murdoch Univ, Sch Vet & Life Sci, Murdoch, WA 6150, Australia

[12] INRA, Inst Ecol & Environm Sci, F-78000 Versailles, France

[13] Univ Valencia, Dept Genet, Burjassot 46100, Valencia, Spain

[14] Univ Valencia, Estruct Recerca Interdisciplinar Biotecnol & Biom, Burjassot 46100, Valencia, Spain

[15] PSL Res Univ, EPHE, DGIMI UMR1333, Pathol Comparee Invertebres CC101, F-34095 Montpellier 5, France

[16] CDFD, Lab Mammalian Genet, Lab block Tuljaguda Opp MJ Market, Hyderabad 500001, Andhra Prades, India

[17] Univ Amsterdam, IBED, Sci Pk 904, NL-1090 GE Amsterdam, Netherlands

[18] Plateforme MGX, Inst Genom Fonct, 141,rue Cardonille, F-34094 Montpellier, France

[19] Southwest Forestry Univ, Key Lab Forest Disaster Warning & Control Yunnan, Kunming 650224, Yunnan, Peoples R China

[20] CSIRO, Clunies Ross St,GPO Box 1700, Acton, ACT 2601, Australia

[21] Univ Sao Paulo, Dept Entomol Acarol, Escola Super Agr Luiz Queiroz, Av Padua Dias 11, BR-13418900 Piracicaba, Brazil

[22] Penn State Univ, Dept Biol, Mueller Lab, Univ Pk, State Coll, PA 16802 USA

[23] Penn State Univ, Dept Plant Sci, 102 Tyson Bldg,Univ Pk, State Coll, PA 16802 USA

[24] CNRS, UMR 8030, 2 Rue Gaston Cremieux, F-91000 Evry, France

[25] Univ Evry Val Essonne, F-91000 Evry, France

[26] CIRAD, CBGP UMR1062, IRD, Montpellier SupAgro,INRA, 755 Ave Campus Agr, F-34988 Montferrier Sur Lez, France

来源：

SCIENTIFIC REPORTS | 2017年 / 7卷

基金：

美国国家科学基金会;

关键词：

FALL ARMYWORM LEPIDOPTERA; PHYLOGENETIC ANALYSIS; RECEPTOR FAMILY; BOMBYX-MORI; STRAINS; ADAPTATION; EVOLUTION; SEQUENCE; SILKWORM; IDENTIFICATION;

D O I：

10.1038/s41598-017-10461-4

中图分类号：

O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];

学科分类号：

07 ; 0710 ; 09 ;

摘要：

Emergence of polyphagous herbivorous insects entails significant adaptation to recognize, detoxify and digest a variety of host-plants. Despite of its biological and practical importance - since insects eat 20% of crops - no exhaustive analysis of gene repertoires required for adaptations in generalist insect herbivores has previously been performed. The noctuid moth Spodoptera frugiperda ranks as one of the world's worst agricultural pests. This insect is polyphagous while the majority of other lepidopteran herbivores are specialist. It consists of two morphologically indistinguishable strains ("C" and "R") that have different host plant ranges. To describe the evolutionary mechanisms that both enable the emergence of polyphagous herbivory and lead to the shift in the host preference, we analyzed whole genome sequences from laboratory and natural populations of both strains. We observed huge expansions of genes associated with chemosensation and detoxification compared with specialist Lepidoptera. These expansions are largely due to tandem duplication, a possible adaptation mechanism enabling polyphagy. Individuals from natural C and R populations show significant genomic differentiation. We found signatures of positive selection in genes involved in chemoreception, detoxification and digestion, and copy number variation in the two latter gene families, suggesting an adaptive role for structural variation.

引用

页数：12

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