Semblance of Heterogeneity in Collective Cell Migration

被引:14
作者
Schumacher, Linus J. [1 ]
Maini, Philip K. [2 ]
Baker, Ruth E. [2 ]
机构
[1] Imperial Coll London, Ctr Integrat Syst Biol & Bioinformat, Dept Life Sci, London SW7 2AZ, England
[2] Univ Oxford, Wolfson Ctr Math Biol, Math Inst, Oxford OX2 6GG, England
基金
英国工程与自然科学研究理事会;
关键词
MOTION;
D O I
10.1016/j.cels.2017.06.006
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Cell population heterogeneity is increasingly a focus of inquiry in biological research. For example, cell migration studies have investigated the heterogeneity of invasiveness and taxis in development, wound healing, and cancer. However, relatively little effort has been devoted to exploring when heterogeneity is mechanistically relevant and how to reliably measure it. Statistical methods from the animal movement literature offer the potential to analyze heterogeneity in collections of cell tracking data. A popular measure of heterogeneity, which we use here as an example, is the distribution of delays in directional cross-correlation. Employing a suitably generic, yet minimal, model of collective cell movement in three dimensions, we show how using such measures to quantify heterogeneity in tracking data can result in the inference of heterogeneity where there is none. Our study highlights a potential pitfall in the statistical analysis of cell population heterogeneity, and we argue that this can be mitigated by the appropriate choice of null models.
引用
收藏
页码:119 / +
页数:10
相关论文
共 26 条
[1]   Cellular Heterogeneity: Do Differences Make a Difference? [J].
Altschuler, Steven J. ;
Wu, Lani F. .
CELL, 2010, 141 (04) :559-563
[2]  
Bouchaud J.P., 2009, 09101205V1QFINST ARX
[3]   Complement Fragment C3a Controls Mutual Cell Attraction during Collective Cell Migration [J].
Carmona-Fontaine, Carlos ;
Theveneau, Eric ;
Tzekou, Apostolia ;
Tada, Masazumi ;
Woods, Mae ;
Page, Karen M. ;
Parsons, Maddy ;
Lambris, John D. ;
Mayor, Roberto .
DEVELOPMENTAL CELL, 2011, 21 (06) :1026-1037
[4]   Diffusion of individual birds in starling flocks [J].
Cavagna, A. ;
Queiros, S. M. Duarte ;
Giardina, I. ;
Stefanini, F. ;
Viale, M. .
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 2013, 280 (1756)
[5]   Tumour-stromal interactions generate emergent persistence in collective cancer cell migration [J].
Chang, William K. ;
Carmona-Fontaine, Carlos ;
Xavier, Joao B. .
INTERFACE FOCUS, 2013, 3 (04)
[6]   Collective motion of groups of self-propelled particles following interacting leaders [J].
Ferdinandy, B. ;
Ozogany, K. ;
Vicsek, T. .
PHYSICA A-STATISTICAL MECHANICS AND ITS APPLICATIONS, 2017, 479 :467-477
[7]   Moving and staying together without a leader [J].
Grégoire, G ;
Chaté, H ;
Tu, YH .
PHYSICA D-NONLINEAR PHENOMENA, 2003, 181 (3-4) :157-170
[8]   Effective guidance of collective migration based on differences in cell states [J].
Inaki, Mikiko ;
Vishnu, Smitha ;
Cliffe, Adam ;
Rorth, Pernille .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2012, 109 (06) :2027-2032
[9]   Droplet Barcoding for Single-Cell Transcriptomics Applied to Embryonic Stem Cells [J].
Klein, Allon M. ;
Mazutis, Linas ;
Akartuna, Ilke ;
Tallapragada, Naren ;
Veres, Adrian ;
Li, Victor ;
Peshkin, Leonid ;
Weitz, David A. ;
Kirschner, Marc W. .
CELL, 2015, 161 (05) :1187-1201
[10]  
Konzack M, 2016, INT J GEOGR INF SCI, P1